ASSESSMENT OF GENETIC DIVERSITY AMONG KIDNEY BEAN (Phaseolus vulgaris L.) CULTIVARS USING EST-SIMPLE SEQUENCE REPEAT (SSR) MARKERS

被引:2
|
作者
Parmar, Subhash Chand [1 ]
Thakur, Nirja [1 ]
Nath, Amarjit K. [1 ]
机构
[1] Dr Yashwant Singh Parmar Univ Hort & Forestry, Coll Hort, Dept Biotechnol, Solan 173230, Himachal Prades, India
关键词
Genetic diversity; Phaseolus vulgaris; polymorphism; simple sequence repeat marker;
D O I
10.5958/0974-4517.2018.00021.6
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Genetic variation among kidney bean (Phaseolus vulgaris L.) cultivars, procured from the farmers of Kinnaur district of Himachal Pradesh (India), was evaluated using EST-SSR markers. A total of 25 primers were used out of which 19 primers showed amplification. The total n0umber of bands amplified was 26, out of which 24 were polymorphic and 2 were monomorphic. On an average, the number of bands generated primer(-1) was 1.37 of which 1.26 was polymorphic and 0.11 were monomorphic. Seven primers produced 14 bands (2 bands primer(-1)) and only one band each was obtained with remaining primers. The number of unique bands were 2 and the size of amplified product ranged from 70 to 800 bp. Similarity between cultivars estimated as per Jaccard's coefficients ranged from 0.17-0.90 indicating substantial diversity in bean cultivars. Maximum similarity coefficient (0.90) was between 'Capsule' and 'Kaju' cultivars while minimum (0.17) between 'Chitra' and 'Luxmi' Dendrogram grouped cultivars into two major clusters. The PIC value was highest for primer SP5.
引用
收藏
页码:163 / 170
页数:8
相关论文
共 50 条
  • [21] Genetic diversity and similarity of pear (Pyrus L.) cultivars native to East Asia revealed by SSR (simple sequence repeat) markers
    Lu Bao
    Kunsong Chen
    Dong Zhang
    Yufen Cao
    Toshiya Yamamoto
    Yuanwen Teng
    Genetic Resources and Crop Evolution, 2007, 54
  • [22] Genetic diversity and similarity of pear (Pyrus L.) cultivars native to East Asia revealed by SSR (simple sequence repeat) markers
    Bao, Lu
    Chen, Kunsong
    Zhang, Dong
    Cao, Yufen
    Yamamoto, Toshiya
    Teng, Yuanwen
    GENETIC RESOURCES AND CROP EVOLUTION, 2007, 54 (05) : 959 - 971
  • [23] ANALYSIS OF GENETIC DIVERSITY OF Ficus carica L. (Moraceae ) COLLECTION USING SIMPLE SEQUENCE REPEAT (SSR) MARKERS
    Marcotuli, Ilaria
    Mazzeo, Andrea
    Nigro, Domenica
    Giove, Stefania Lucia
    Giancaspro, Angelica
    Colasuonno, Pasqualina
    Prgomet, Zeljko
    Prgomet, Iva
    Tarantino, Annalisa
    Ferrara, Giuseppe
    Gadaleta, Agata
    ACTA SCIENTIARUM POLONORUM-HORTORUM CULTUS, 2019, 18 (04): : 93 - 109
  • [24] MOLECULAR DIVERSITY OF COMMON BEAN (PHASEOLUS VULGARIS L.) CULTIVARS
    Filimon, Raluca
    Nechifor, B.
    Szilagyi, Lizica
    SCIENTIFIC PAPERS-SERIES A-AGRONOMY, 2011, 54 : 344 - 349
  • [25] Analysis of genetic diversity, population structure and phylogenetic relationships of rice (Oryza sativa L.) cultivars using simple sequence repeat (SSR) markers
    Salem, Khaled F. M.
    Safhi, Fatmah Ahmed
    Alwutayd, Khairiah Mubarak
    Abozahra, Mahmoud S.
    Almohisen, Ibrahim A. A.
    Alsharari, Sultan F.
    Gangwar, Priyanka
    Rady, Asmaa M. S.
    Hendawy, Marwa F. A.
    Ibrahim, Amira A.
    GENETIC RESOURCES AND CROP EVOLUTION, 2024, 71 (05) : 2213 - 2227
  • [26] Analysis of genetic diversity, population structure and phylogenetic relationships of rice (Oryza sativa L.) cultivars using simple sequence repeat (SSR) markers
    Khaled F. M. Salem
    Fatmah Ahmed Safhi
    Khairiah Mubarak Alwutayd
    Mahmoud S. Abozahra
    Ibrahim A. A. Almohisen
    Sultan F. Alsharari
    Priyanka Gangwar
    Asmaa M. S. Rady
    Marwa F. A. Hendawy
    Amira A. Ibrahim
    Genetic Resources and Crop Evolution, 2024, 71 : 2213 - 2227
  • [27] Genetic diversity among common bean (Phaseolus vulgaris L.) Greek landraces and commercial cultivars: nutritional components, RAPD and morphological markers
    Mavromatis, A. G.
    Arvanitoyannis, I. S.
    Korkovelos, A. E.
    Giakountis, A.
    Chatzitheodorou, V. A.
    Goulas, C. K.
    SPANISH JOURNAL OF AGRICULTURAL RESEARCH, 2010, 8 (04) : 986 - 994
  • [28] ASSESSMENT OF MOLECULAR GENETIC DIVERSITY OF ECUADORIAN RICE CULTIVARS USING SIMPLE SEQUENCE REPEAT MARKERS
    Perez-Almeida, Iris
    Celi-Heran, Roberto
    Sanchez-Mora, Fernando
    Paz-Carrasco, Lenin
    Ramos-Viteri, Belen
    BIOAGRO, 2019, 31 (01) : 3 - 12
  • [29] Genetic diversity of common bean (Phaseolus vulgaris L.) germplasm from Serbia, as revealed by single sequence repeats (SSR)
    Savic, Aleksandra
    Pipan, Barbara
    Vasic, Mirjana
    Meglic, Vladimir
    SCIENTIA HORTICULTURAE, 2021, 288
  • [30] ASSESSMENT OF THE GENETIC DIVERSITY IN SUGAR BEET (BETA VULGARIS L.) USING SSR MARKERS
    Amangeldiyeva, A.
    Daniyarova, A.
    Tabynbayeva, L. K.
    Bastaubayeva, S.
    Kovalchuk, N.
    Yerzhebayeva, R.
    SABRAO JOURNAL OF BREEDING AND GENETICS, 2023, 55 (05): : 1616 - 1628