BACKBONE H-1 AND N-15 RESONANCE ASSIGNMENTS OF THE N-TERMINAL SH3 DOMAIN OF DRK IN FOLDED AND UNFOLDED STATES USING ENHANCED-SENSITIVITY PULSED-FIELD GRADIENT NMR TECHNIQUES

被引:559
作者
ZHANG, OW
KAY, LE
OLIVIER, JP
FORMANKAY, JD
机构
[1] HOSP SICK CHILDREN,DIV BIOCHEM RES,TORONTO M5G 1X8,ON,CANADA
[2] UNIV TORONTO,PROT ENGN NETWORK CTR EXCELLENCE,TORONTO M5S 1A8,ON,CANADA
[3] UNIV TORONTO,DEPT MED GENET,TORONTO M5S 1A8,ON,CANADA
[4] UNIV TORONTO,DEPT BIOCHEM & CHEM,TORONTO M5S 1A8,ON,CANADA
[5] MT SINAI HOSP,SAMUEL LUNENFELD RES INST,DIV MOLEC & DEV BIOL,TORONTO M5G 1X5,ON,CANADA
关键词
N-15 CHEMICAL SHIFTS; UNFOLDED STATE; PULSED HELD GRADIENTS; SENSITIVITY ENHANCED; WATER SUPPRESSION; SH3; DOMAIN;
D O I
10.1007/BF00398413
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The backbone H-1 and N-15 resonances of the N-terminal SH3 domain of the Drosophila signaling adapter protein, drk, have been assigned. This domain is in slow exchange on the NMR timescale between folded and predominantly unfolded states. Data were collected on both states simultaneously, on samples of the SH3 in near physiological buffer exhibiting an approximately 1:1 ratio of the two states. NMR methods which exploit the chemical shift dispersion of the N-15 resonances of unfolded states and pulsed held gradient water suppression approaches for avoiding saturation and dephasing of amide protons which rapidly exchange with solvent were utilized for the assignment.
引用
收藏
页码:845 / 858
页数:14
相关论文
共 37 条
[11]   ENHANCED-SENSITIVITY TRIPLE-RESONANCE SPECTROSCOPY WITH MINIMAL H2O SATURATION [J].
KAY, LE ;
XU, GY ;
YAMAZAKI, T .
JOURNAL OF MAGNETIC RESONANCE SERIES A, 1994, 109 (01) :129-133
[12]   PURE ABSORPTION GRADIENT ENHANCED HETERONUCLEAR SINGLE QUANTUM CORRELATION SPECTROSCOPY WITH IMPROVED SENSITIVITY [J].
KAY, LE ;
KEIFER, P ;
SAARINEN, T .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (26) :10663-10665
[13]  
KHODA D, 1993, CELL, V72, P953
[14]   SH2 AND SH3 DOMAINS - ELEMENTS THAT CONTROL INTERACTIONS OF CYTOPLASMIC SIGNALING PROTEINS [J].
KOCH, CA ;
ANDERSON, D ;
MORAN, MF ;
ELLIS, C ;
PAWSON, T .
SCIENCE, 1991, 252 (5006) :668-674
[15]   STRUCTURE OF THE PI3K SH3 DOMAIN AND ANALYSIS OF THE SH3 FAMILY [J].
KOYAMA, S ;
YU, HT ;
DALGARNO, DC ;
SHIN, TB ;
ZYDOWSKY, LD ;
SCHREIBER, SL .
CELL, 1993, 72 (06) :945-952
[16]   STRUCTURAL CHARACTERIZATION OF THE FK506 BINDING-PROTEIN UNFOLDED IN UREA AND GUANIDINE-HYDROCHLORIDE [J].
LOGAN, TM ;
THERIAULT, Y ;
FESIK, SW .
JOURNAL OF MOLECULAR BIOLOGY, 1994, 236 (02) :637-648
[17]  
LOGAN TM, 1993, J BIOMOL NMR, V3, P225
[18]   FORMATION OF A HYDROPHOBIC CLUSTER IN DENATURED BOVINE PANCREATIC TRYPSIN-INHIBITOR [J].
LUMB, KJ ;
KIM, PS .
JOURNAL OF MOLECULAR BIOLOGY, 1994, 236 (02) :412-420
[19]   RAPID RECORDING OF 2D NMR-SPECTRA WITHOUT PHASE CYCLING - APPLICATION TO THE STUDY OF HYDROGEN-EXCHANGE IN PROTEINS [J].
MARION, D ;
IKURA, M ;
TSCHUDIN, R ;
BAX, A .
JOURNAL OF MAGNETIC RESONANCE, 1989, 85 (02) :393-399
[20]   SELECTIVE SHAPED PULSE DECOUPLING IN NMR - HOMONUCLEAR [C-13]CARBONYL DECOUPLING [J].
MCCOY, MA ;
MUELLER, L .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1992, 114 (06) :2108-2112