CRYSTAL-STRUCTURE OF THE 10TH TYPE-III CELL-ADHESION MODULE OF HUMAN FIBRONECTIN

被引:188
作者
DICKINSON, CD
VEERAPANDIAN, B
DAI, XP
HAMLIN, RC
XUONG, NH
RUOSLAHTI, E
ELY, KR
机构
[1] LA JOLLA CANC RES FDN,CANC RES CTR,LA JOLLA,CA 92037
[2] UNIV CALIF SAN DIEGO,DEPT CHEM & BIOL,LA JOLLA,CA 92093
[3] UNIV CALIF SAN DIEGO,DEPT PHYS,LA JOLLA,CA 92093
[4] SAN DIEGO MULTIWIRE SYST,POWAY,CA
关键词
CELL ADHESION; FIBRONECTIN; RGD; CRYSTAL STRUCTURE;
D O I
10.1016/0022-2836(94)90013-2
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The crystal structure of the cell adhesion module of fibronectin (FNIII10)_has been determined at 1·8 Å resolution. A recombinant fragment corresponding to the tenth type III module of human fibronectin was crystallized in space group P21 with a = 30·, b = 35·1 and c = 37·7 A ̊ and β = 107°. The structure was determined by molecular replacement and refined by least squares methods. The crystallographic R-factpr for the final model of the 91 amino acid module plus 56 solvent atoms is 0·18 for 10 to 1·8 Å data. The module consists of two layers of β-sheet, one with three antiparallel strands and the other with four antiparallel strands. The β-sheets enclose a hydrophobic core of 24 amino acid side-chains. The module contains the RGD cell recognition sequence in a flexible loop connecting two β-strands. The tertiary structure of the FNIII10 module has been used to develop a structure-based sequence alignment of 17 type III modules in fibronectin based on the striking conservation of homologous hydrophobic residues. A similar pattern of homologous alternating hydrophobic residues is also evident in a comparison of type III modules in proteins unrelated to fibronectin such as cytokine receptors and muscle proteins. © 1994.
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页码:1079 / 1092
页数:14
相关论文
共 63 条
[1]   SOLUTION STRUCTURE OF KISTRIN, A POTENT PLATELET-AGGREGATION INHIBITOR AND GP-IIB-IIIA ANTAGONIST [J].
ADLER, M ;
LAZARUS, RA ;
DENNIS, MS ;
WAGNER, G .
SCIENCE, 1991, 253 (5018) :445-448
[2]   ARG-GLY-ASP CONSTRAINED WITHIN CYCLIC PENTAPEPTIDES - STRONG AND SELECTIVE INHIBITORS OF CELL-ADHESION TO VITRONECTIN AND LAMININ FRAGMENT-P1 [J].
AUMAILLEY, M ;
GURRATH, M ;
MULLER, G ;
CALVETE, J ;
TIMPL, R ;
KESSLER, H .
FEBS LETTERS, 1991, 291 (01) :50-54
[3]   H-1-NMR ASSIGNMENT AND SECONDARY STRUCTURE OF THE CELL-ADHESION TYPE-III MODULE OF FIBRONECTIN [J].
BARON, M ;
MAIN, AL ;
DRISCOLL, PC ;
MARDON, HJ ;
BOYD, J ;
CAMPBELL, ID .
BIOCHEMISTRY, 1992, 31 (07) :2068-2073
[4]   STRUCTURE OF THE FIBRONECTIN TYPE 1 MODULE [J].
BARON, M ;
NORMAN, D ;
WILLIS, A ;
CAMPBELL, ID .
NATURE, 1990, 345 (6276) :642-646
[6]   PROTEIN DATA BANK - COMPUTER-BASED ARCHIVAL FILE FOR MACROMOLECULAR STRUCTURES [J].
BERNSTEIN, FC ;
KOETZLE, TF ;
WILLIAMS, GJB ;
MEYER, EF ;
BRICE, MD ;
RODGERS, JR ;
KENNARD, O ;
SHIMANOUCHI, T ;
TASUMI, M .
JOURNAL OF MOLECULAR BIOLOGY, 1977, 112 (03) :535-542
[7]   OMITMAP - AN ELECTRON-DENSITY MAP SUITABLE FOR THE EXAMINATION OF ERRORS IN A MACROMOLECULAR MODEL [J].
BHAT, TN ;
COHEN, GH .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1984, 17 (AUG) :244-248
[8]  
BOGUSKY MJ, 1992, INT J PEPT PROT RES, V39, P63
[9]   SOLUTION OF THE PHASE PROBLEM IN THE X-RAY-DIFFRACTION METHOD FOR PROTEINS WITH THE NUCLEAR MAGNETIC-RESONANCE SOLUTION STRUCTURE AS INITIAL MODEL - PATTERSON SEARCH AND REFINEMENT FOR THE ALPHA-AMYLASE INHIBITOR TENDAMISTAT [J].
BRAUN, W ;
EPP, O ;
WUTHRICH, K ;
HUBER, R .
JOURNAL OF MOLECULAR BIOLOGY, 1989, 206 (04) :669-676
[10]   SOLUTION OF A PROTEIN CRYSTAL-STRUCTURE WITH A MODEL OBTAINED FROM NMR INTERPROTON DISTANCE RESTRAINTS [J].
BRUNGER, AT ;
CAMPBELL, RL ;
CLORE, GM ;
GRONENBORN, AM ;
KARPLUS, M ;
PETSKO, GA ;
TEETER, MM .
SCIENCE, 1987, 235 (4792) :1049-1053