A HEURISTIC MOLECULAR-DYNAMICS APPROACH FOR THE PREDICTION OF A MOLECULAR-CRYSTAL STRUCTURE

被引:25
|
作者
TAJIMA, N
TANAKA, T
ARIKAWA, T
SAKURAI, T
TERAMAE, S
HIRANO, T
机构
[1] OCHANOMIZU UNIV,FAC SCI,DEPT CHEM,BUNKYO KU,TOKYO 112,JAPAN
[2] UNIV TOKYO,FAC ENGN,DEPT APPL CHEM,BUNKYO KU,TOKYO 113,JAPAN
[3] TORAY SYST CTR,CHIBA 279,JAPAN
关键词
D O I
10.1246/bcsj.68.519
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
A general method has been developed to predict the structures of molecular crystals without any constraints on the space symmetry nor on the lattice constants. A constant-pressure molecular dynamics (MD) technique, treating the lattice constants as variables, is employed in the search of candidate structures (''shaking'' process). A heuristic MD search is proposed to reduce redundant sampling in the shaking process. The structures of the thus sampled species are further optimized in geometry by the steepest descent method (''quenching'' process). This general method was coded in a program named MDCP (Molecular Dynamics for Crystal Packing), and was applied to the prediction of the crystal structures of CO2, benzene, and pyrimidine molecules, as test examples. For CO2 and benzene crystals, the experimentally observed structures were well reproduced through our method. For pyrimidine, however, a slight difficulty was observed under the atom-atom potentials employed here, although near-miss structures were frequently encountered.
引用
收藏
页码:519 / 527
页数:9
相关论文
共 50 条
  • [1] DYNAMICS OF MOLECULAR-CRYSTAL VIBRATIONS
    DLOTT, DD
    TOPICS IN APPLIED PHYSICS, 1989, 65 : 167 - 200
  • [2] DYNAMICS OF ANHARMONIC MOLECULAR-CRYSTAL
    PERSHIN, VK
    PERSHIN, VK
    FIZIKA TVERDOGO TELA, 1981, 23 (07): : 2200 - 2203
  • [3] A MOLECULAR-DYNAMICS STUDY OF THE ISOTOPIC-SUBSTITUTION EFFECTS ON THE LINESHAPE OF AN INTERNAL-MODE IN A MOLECULAR-CRYSTAL
    CARDINI, G
    SCHETTINO, V
    CHEMICAL PHYSICS LETTERS, 1992, 200 (06) : 552 - 558
  • [4] Molecular-dynamics approach to the magnetic structure of γ-Fe
    Kakehashi, Y
    Kimura, N
    PHYSICAL REVIEW B, 1999, 60 (05): : 3316 - 3323
  • [5] A new molecular-dynamics based approach for molecular crystal structure search -: art. no. 051108
    Buch, V
    Martonák, R
    Parrinello, M
    JOURNAL OF CHEMICAL PHYSICS, 2005, 123 (05):
  • [6] Computer molecular-dynamics simulation of the structure of crystal nanomaterials
    Sarkisov, P. D.
    Butusov, O. B.
    Meshalkin, V. P.
    Sevast'yanov, V. G.
    Pashaev, V. B.
    THEORETICAL FOUNDATIONS OF CHEMICAL ENGINEERING, 2013, 47 (02) : 83 - 88
  • [7] Computer molecular-dynamics simulation of the structure of crystal nanomaterials
    P. D. Sarkisov
    O. B. Butusov
    V. P. Meshalkin
    V. G. Sevast’yanov
    V. B. Pashaev
    Theoretical Foundations of Chemical Engineering, 2013, 47 : 83 - 88
  • [8] A MOLECULAR-DYNAMICS STUDY OF CRYSTAL-STRUCTURE TRANSFORMATIONS
    PARRINELLO, M
    RAHMAN, A
    BULLETIN OF THE AMERICAN PHYSICAL SOCIETY, 1981, 26 (03): : 380 - 380
  • [9] CRYSTAL-STRUCTURE AND MOLECULAR-DYNAMICS OF GUANIDINIUM PERCHLORATE
    PAJAK, Z
    GROTTEL, M
    KOZIOL, AE
    JOURNAL OF THE CHEMICAL SOCIETY-FARADAY TRANSACTIONS II, 1982, 78 : 1529 - 1538
  • [10] Variational approach for the Holstein molecular-crystal model
    Cataudella, V
    De Filippis, G
    Iadonisi, G
    PHYSICAL REVIEW B, 1999, 60 (22) : 15163 - 15172