SEQUENCE-SPECIFIC [H-1]NMR RESONANCE ASSIGNMENTS AND SECONDARY STRUCTURE IDENTIFICATION FOR 1-ZINC AND 2-ZINC FINGER CONSTRUCTS FROM SWI5 - A HYDROPHOBIC CORE INVOLVING 4 INVARIANT RESIDUES

被引:50
作者
NEUHAUS, D
NAKASEKO, Y
NAGAI, K
KLUG, A
机构
[1] MRC Laboratory for Molecular Biology, Cambridge, CB2 2QH England, Hills Road
关键词
DNA binding; Secondary structure; Sequence-specific resonance assignment; Zinc finger; [!sup]1[!/sup]H]Nuclear magnetic resonance; 2-dimensional;
D O I
10.1016/0014-5793(90)80184-K
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Complete [1H]NMR resonance assignments are presented for the second of the three zinc fingers from SWI5 as it appears in both 1- and 2-finger constructs. Signals from finger 2 are unaffected by the presence or absence of finger 1, showing that the protein has a modular construction. The structure of finger 2 comprises a helix running from N56 to Q67, and a region approximating to an anti-parallel β-sheet running from Y42 to F53. These features combine to produce a hydrophobic core in the structure involving the invariant residues Y42, F53, L59 and H62. © 1990.
引用
收藏
页码:179 / 184
页数:6
相关论文
共 21 条
[2]   MULTIPLE QUANTUM SPIN-ECHO SPECTROSCOPY [J].
BODENHAUSEN, G ;
VOLD, RL ;
VOLD, RR .
JOURNAL OF MAGNETIC RESONANCE, 1980, 37 (01) :93-106
[3]  
CARR MD, IN PRESS EUR J BIOCH
[4]  
DAIKUN GP, 1986, NATURE, V324, P698
[5]   ELIMINATION OF BASELINE ARTIFACTS IN SPECTRA AND THEIR INTEGRALS [J].
HOULT, DI ;
CHEN, CN ;
EDEN, H ;
EDEN, M .
JOURNAL OF MAGNETIC RESONANCE, 1983, 51 (01) :110-117
[6]   IMPROVING TWO-DIMENSIONAL NMR-SPECTRA BY T1 RIDGE SUBTRACTION [J].
KLEVIT, RE .
JOURNAL OF MAGNETIC RESONANCE, 1985, 62 (03) :551-555
[7]   ZINC FINGERS - A NOVEL PROTEIN MOTIF FOR NUCLEIC-ACID RECOGNITION [J].
KLUG, A ;
RHODES, D .
TRENDS IN BIOCHEMICAL SCIENCES, 1987, 12 (12) :464-469
[8]   COMPLETE ASSIGNMENT OF THE H-1-NMR SPECTRUM OF A SYNTHETIC ZINC FINGER FROM XFIN - SEQUENTIAL RESONANCE ASSIGNMENTS AND SECONDARY STRUCTURE [J].
LEE, MS ;
CAVANAGH, J ;
WRIGHT, PE .
FEBS LETTERS, 1989, 254 (1-2) :159-164
[9]   3-DIMENSIONAL SOLUTION STRUCTURE OF A SINGLE ZINC FINGER DNA-BINDING DOMAIN [J].
LEE, MS ;
GIPPERT, GP ;
SOMAN, KV ;
CASE, DA ;
WRIGHT, PE .
SCIENCE, 1989, 245 (4918) :635-637
[10]   APPLICATION OF PHASE SENSITIVE TWO-DIMENSIONAL CORRELATED SPECTROSCOPY (COSY) FOR MEASUREMENTS OF H-1-H-1 SPIN-SPIN COUPLING-CONSTANTS IN PROTEINS [J].
MARION, D ;
WUTHRICH, K .
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1983, 113 (03) :967-974