ISOTOPE EFFECTS IN PEPTIDE GROUP HYDROGEN-EXCHANGE

被引:329
作者
CONNELLY, GP [1 ]
BAI, YW [1 ]
JENG, MF [1 ]
ENGLANDER, SW [1 ]
机构
[1] UNIV PENN,SCH MED,DEPT BIOCHEM & BIOPHYS,JOHNSON RES FDN,PHILADELPHIA,PA 19104
来源
PROTEINS-STRUCTURE FUNCTION AND GENETICS | 1993年 / 17卷 / 01期
关键词
HYDROGEN EXCHANGE; EQUILIBRIUM ISOTOPE EFFECTS; KINETIC ISOTOPE EFFECTS; PROTEIN STRUCTURE; POLY-DL-ALANINE;
D O I
10.1002/prot.340170111
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Kinetic and equilibrium isotope effects in peptide group hydrogen exchange reactions were evaluated. Unlike many other reactions, kinetic isotope effects in amide hydrogen exchange are small because exchange pathways are not limited by bond-breaking steps. Rate constants for the acid-catalyzed exchange of peptide group NH, ND, and NT in H2O are essentially identical, but a solvent isotope effect doubles the rate in D2O. Rate constants for base-catalyzed exchange in H2O decrease slowly in the order NH>ND>NT. The alkaline rate constant in D2O is very close to that in H2O when account is taken of the glass electrode pH artifact and the difference in solvent ionization constant. Small equilibrium isotope effects lead to an excess equilibrium accumulation of the heavier isotopes by the peptide group. Results obtained are expressed in terms of rate constants for the random coil polypeptide, poly-DL-alanine, to provide reference rates for protein hydrogen exchange studies as described in Bai et al. [preceding paper in this issue]. (C) 1993 Wiley-Liss, Inc.
引用
收藏
页码:87 / 92
页数:6
相关论文
共 27 条
[1]   HYDROGEN-EXCHANGE STUDIES OF PROTEINS - RECENT ADVANCES IN MEDIUM AND HIGH-RESOLUTION METHODS [J].
ALLEWELL, NM .
JOURNAL OF BIOCHEMICAL AND BIOPHYSICAL METHODS, 1983, 7 (04) :345-357
[2]   PRIMARY STRUCTURE EFFECTS ON PEPTIDE GROUP HYDROGEN-EXCHANGE [J].
BAI, YW ;
MILNE, JS ;
MAYNE, L ;
ENGLANDER, SW .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1993, 17 (01) :75-86
[3]  
BALDWINRL, 1993, CURR OPIN STRUCT BIO, V3, P84
[4]   CHARACTERIZATION OF A PARTLY FOLDED PROTEIN BY NMR METHODS - STUDIES ON THE MOLTEN GLOBULE STATE OF GUINEA-PIG ALPHA-LACTALBUMIN [J].
BAUM, J ;
DOBSON, CM ;
EVANS, PA ;
HANLEY, C .
BIOCHEMISTRY, 1989, 28 (01) :7-13
[5]   NUCLEAR MAGNETIC RESONANCE STUDY OF THE PROTOLYSIS AND IONIZATION OF N-METHYLACETAMIDE [J].
BERGER, A ;
LOEWENSTEIN, A ;
MEIBOOM, S .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1959, 81 (01) :62-67
[7]   MEASUREMENT AND CALIBRATION OF PEPTIDE GROUP HYDROGEN-DEUTERIUM EXCHANGE BY ULTRAVIOLET SPECTROPHOTOMETRY [J].
ENGLANDER, JJ ;
CALHOUN, DB ;
ENGLANDER, SW .
ANALYTICAL BIOCHEMISTRY, 1979, 92 (02) :517-524
[8]   PROTEIN HYDROGEN-EXCHANGE STUDIED BY THE FRAGMENT SEPARATION METHOD [J].
ENGLANDER, JJ ;
ROGERO, JR ;
ENGLANDER, SW .
ANALYTICAL BIOCHEMISTRY, 1985, 147 (01) :234-244
[9]   HYDROGEN-EXCHANGE [J].
ENGLANDER, SW ;
DOWNER, NW ;
TEITELBAUM, H .
ANNUAL REVIEW OF BIOCHEMISTRY, 1972, 41 :903-+
[10]   PROTEIN FOLDING STUDIED USING HYDROGEN-EXCHANGE LABELING AND 2-DIMENSIONAL NMR [J].
ENGLANDER, SW ;
MAYNE, L .
ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE, 1992, 21 :243-265