PSEUDOMONAS-AERUGINOSA ALIPHATIC AMIDASE IS RELATED TO THE NITRILASE CYANIDE HYDRATASE ENZYME FAMILY AND CYS(166) IS PREDICTED TO BE THE ACTIVE-SITE NUCLEOPHILE OF THE CATALYTIC MECHANISM
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作者:
NOVO, C
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机构:UNIV LONDON KINGS COLL, DIV BIOMED SCI, MOLEC BIOL & BIOPHYS SECT, LONDON WC2R 2LS, ENGLAND
NOVO, C
TATA, R
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机构:UNIV LONDON KINGS COLL, DIV BIOMED SCI, MOLEC BIOL & BIOPHYS SECT, LONDON WC2R 2LS, ENGLAND
TATA, R
CLEMENTE, A
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机构:UNIV LONDON KINGS COLL, DIV BIOMED SCI, MOLEC BIOL & BIOPHYS SECT, LONDON WC2R 2LS, ENGLAND
CLEMENTE, A
BROWN, PR
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机构:UNIV LONDON KINGS COLL, DIV BIOMED SCI, MOLEC BIOL & BIOPHYS SECT, LONDON WC2R 2LS, ENGLAND
BROWN, PR
机构:
[1] UNIV LONDON KINGS COLL, DIV BIOMED SCI, MOLEC BIOL & BIOPHYS SECT, LONDON WC2R 2LS, ENGLAND
AMIDASE;
NITRILASE;
PHYLOGENETIC TREE;
ACTIVE SITE PREDICTION;
PSEUDOMONAS AERUGINOSA;
RHODOCOCCUS ERYTHROPOLIS;
D O I:
10.1016/0014-5793(95)00585-W
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
A database search indicated homology between some members of the nitrilase/cyanide hydratase family, Pseudomonas aeruginosa and Rhodococcus erythropolis amidases and several other proteins, some of unknown function, BLOCK and PROFILE searches confirmed these relationships and showed that four regions of the P. aeruginosa amidase had significant homology with corresponding regions of nitrilases. A phylogenetic tree placed the P. aeruginosa and R. erythropolis amidases in a group with nitrilases but separated other amidases into three groups, The active site cysteine in nitrilases is conserved in the P. aeruginosa amidase indicating that Cys(166) is the active site nucleophile.