SECONDARY STRUCTURE-ANALYSIS OF THE SCRAPIE-ASSOCIATED PROTEIN PRP 27-30 IN WATER BY INFRARED-SPECTROSCOPY

被引:737
作者
CAUGHEY, BW [1 ]
DONG, A [1 ]
BHAT, KS [1 ]
ERNST, D [1 ]
HAYES, SF [1 ]
CAUGHEY, WS [1 ]
机构
[1] COLORADO STATE UNIV,DEPT BIOCHEM,FT COLLINS,CO 80523
关键词
D O I
10.1021/bi00245a003
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A protease-resistant form of the protein PrP (PrP-res) accumulates in tissues of mammals infected with scrapie, Creutzfeldt-Jakob disease, and related transmissible neurodegenerative diseases. This abnormal form of PrP can aggregate into insoluble amyloid-like fibrils and plaques and has been identified as the major component of brain fractions enriched for scrapie infectivity. Using a recently developed technique in Fourier transform infrared spectroscopy which allows protein conformational analysis in aqueous media, we have studied the secondary structure of the proteinase K resistant core of PrP-res (PrP-res 27-30) as it exists in highly infectious fibril preparations. Second-derivative analysis of the infrared spectra has enabled us to quantitate the relative amounts of different secondary structures in the PrP-res aggregates. The analysis indicated that PrP-res 27-30 is predominantly composed of beta-sheet (47%), which is consistent with its amyloid-like properties. In addition, significant amounts of turn (31%) and alpha-helix (17%) were identified, indicating that amyloid-like fibrils need not be exclusively beta-sheet. The infrared-based secondary structure compositions were then used as constraints to improve the theoretical localization of the secondary structures within PrP-res 27-30.
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页码:7672 / 7680
页数:9
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