Description of Endozoicomonas arenosclerae sp. nov. using a genomic taxonomy approach

被引:0
|
作者
Luciana R. Appolinario
Diogo A. Tschoeke
Cintia P. J. Rua
Tainá Venas
Mariana E. Campeão
Gilda R. S. Amaral
Luciana Leomil
Louisi de Oliveira
Verônica Viana Vieira
Koko Otsuki
Jean Swings
Fabiano L. Thompson
Cristiane C. Thompson
机构
[1] Universidade Federal do Rio de Janeiro,Instituto de Biologia
[2] Universidade de São Paulo,Instituto de Química de São Carlos
[3] Instituto Oswaldo Cruz (IOC),Laboratory for Microbiology
[4] FIOCRUZ,SAGE
[5] Ghent University,COPPE
[6] Federal University of Rio de Janeiro,undefined
来源
Antonie van Leeuwenhoek | 2016年 / 109卷
关键词
Endozoicomonas new species; Genomes; Comparative genomics; Genomic taxonomy;
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学科分类号
摘要
The taxonomic position of strains Ab112T (CBAS 572T) and Ab227_MC (CBAS 573) was evaluated by means of genomic taxonomy. These isolates represent the dominant flora cultured from the healthy marine sponge Arenosclera brasiliensis, endemic to Rio de Janeiro. Strains CBAS 572T and CBAS 573 shared >98 % 16S rRNA sequence identity with Endozoicomonas numazuensis and Endozoicomonas montiporae. In silico DNA–DNA Hybridization, i.e. genome-to-genome distance (GGD), amino acid identity (AAI) and average nucleotide identity (ANI) further showed that these strains had <70 %, at maximum 71.1 and 78 % of identity, respectively, to their closest neighbours E. numazuensis and E. montiporae. The DNA G+C content of CBAS 572T and CBAS 573 were 47.6 and 47.7 mol%, respectively. Phenotypic and chemotaxonomic features also allowed a separation from the type strains of their phylogenetic neighbours. Useful phenotypic features for discriminating CBAS 572T and CBAS 573 from E. numazuensis and E. montiporae species include C8 esterase, N-acetyl-β-glucosaminidase, citric acid, uridine and siderophore. The species Endozoicomonas arenosclerae sp. nov. is proposed to harbour the new isolates. The type strain is CBAS 572T (=Ab112T).
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页码:431 / 438
页数:7
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