Long-read metagenomic sequencing reveals shifts in associations of antibiotic resistance genes with mobile genetic elements from sewage to activated sludge

被引:0
|
作者
Dongjuan Dai
Connor Brown
Helmut Bürgmann
D. G. Joakim Larsson
Indumathi Nambi
Tong Zhang
Carl-Fredrik Flach
Amy Pruden
Peter J. Vikesland
机构
[1] Virginia Polytechnic and State University,Department of Civil and Environmental Engineering
[2] Virginia Polytechnic and State University,Department of Genetics, Bioinformatics, and Computational Biology
[3] Eawag: Swiss Federal Institute of Aquatic Science and Technology,Institute of Biomedicine, Department of Infectious Diseases
[4] University of Gothenburg,Centre for Antibiotic Resistance Research (CARe)
[5] University of Gothenburg,Department of Civil Engineering
[6] Indian Institute of Technology,Department of Civil Engineering
[7] The University of Hong Kong,undefined
来源
Microbiome | / 10卷
关键词
Antibiotic resistance; Wastewater; Resistome; Plasmid; Mobile genetic elements; Wastewater treatment; Long read sequencing;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [1] Long-read metagenomic sequencing reveals shifts in associations of antibiotic resistance genes with mobile genetic elements from sewage to activated sludge
    Dai, Dongjuan
    Brown, Connor
    Burgmann, Helmut
    Larsson, D. G. Joakim
    Nambi, Indumathi
    Zhang, Tong
    Flach, Carl-Fredrik
    Pruden, Amy
    Vikesland, Peter J.
    MICROBIOME, 2022, 10 (01)
  • [2] Plasmid Metagenome Reveals High Levels of Antibiotic Resistance Genes and Mobile Genetic Elements in Activated Sludge
    Zhang, Tong
    Zhang, Xu-Xiang
    Ye, Lin
    PLOS ONE, 2011, 6 (10):
  • [3] Long-read metagenomic exploration of extrachromosomal mobile genetic elements in the human gut
    Yoshihiko Suzuki
    Suguru Nishijima
    Yoshikazu Furuta
    Jun Yoshimura
    Wataru Suda
    Kenshiro Oshima
    Masahira Hattori
    Shinichi Morishita
    Microbiome, 7
  • [4] Long-read metagenomic exploration of extrachromosomal mobile genetic elements in the human gut
    Suzuki, Yoshihiko
    Nishijima, Suguru
    Furuta, Yoshikazu
    Yoshimura, Jun
    Suda, Wataru
    Oshima, Kenshiro
    Hattori, Masahira
    Morishita, Shinichi
    MICROBIOME, 2019, 7 (01)
  • [5] Hyperthermophilic Composting Accelerates the Removal of Antibiotic Resistance Genes and Mobile Genetic Elements in Sewage Sludge
    Liao, Hanpeng
    Lu, Xiaomei
    Rensing, Christopher
    Friman, Ville Petri
    Geisen, Stefan
    Chen, Zhi
    Yu, Zhen
    Wei, Zhong
    Zhou, Shungui
    Zhu, Yongguan
    ENVIRONMENTAL SCIENCE & TECHNOLOGY, 2018, 52 (01) : 266 - 276
  • [6] Metagenomic analysis reveals wastewater treatment plants as hotspots of antibiotic resistance genes and mobile genetic elements
    Guo, Jianhua
    Li, Jie
    Chen, Hui
    Bond, Philip L.
    Yuan, Zhiguo
    WATER RESEARCH, 2017, 123 : 468 - 478
  • [7] Long-read metagenomic sequencing reveals that high-copy small plasmids shape the highly prevalent antibiotic resistance genes in animal fecal microbiome
    Peng, Kai
    Liu, Yong-Xin
    Sun, Xinran
    Wang, Qiaojun
    Du, Pengcheng
    Zhang, Yunzeng
    Wang, Mianzhi
    Wang, Zhiqiang
    Li, Ruichao
    SCIENCE OF THE TOTAL ENVIRONMENT, 2023, 893
  • [8] Long-Read Sequencing Reveals Evolution and Acquisition of Antimicrobial Resistance and Virulence Genes in Salmonella enterica
    Li, Cong
    Tyson, Gregory H.
    Hsu, Chih-Hao
    Harrison, Lucas
    Strain, Errol
    Tran, Thu-Thuy
    Tillman, Glenn E.
    Dessai, Uday
    McDermott, Patrick F.
    Zhao, Shaohua
    FRONTIERS IN MICROBIOLOGY, 2021, 12
  • [9] Metagenomic Profiling of Antibiotic Resistance Genes and Mobile Genetic Elements in a Tannery Wastewater Treatment Plant
    Wang, Zhu
    Zhang, Xu-Xiang
    Huang, Kailong
    Miao, Yu
    Shi, Peng
    Liu, Bo
    Long, Chao
    Li, Aimin
    PLOS ONE, 2013, 8 (10):
  • [10] Characterization of Mobile Genetic Elements Using Long-Read Sequencing for Tracking Listeria monocytogenes from Food Processing Environments
    Kwon, Hee Jin
    Chen, Zhao
    Evans, Peter
    Meng, Jianghong
    Chen, Yi
    PATHOGENS, 2020, 9 (10): : 1 - 22