A Multiple-Relaxation-Time Lattice-Boltzmann Model for Bacterial Chemotaxis: Effects of Initial Concentration, Diffusion, and Hydrodynamic Dispersion on Traveling Bacterial Bands
被引:0
|
作者:
Zhifeng Yan
论文数: 0引用数: 0
h-index: 0
机构:The Johns Hopkins University,Department of Geography and Environmental Engineering
Zhifeng Yan
Markus Hilpert
论文数: 0引用数: 0
h-index: 0
机构:The Johns Hopkins University,Department of Geography and Environmental Engineering
Markus Hilpert
机构:
[1] The Johns Hopkins University,Department of Geography and Environmental Engineering
[2] Johns Hopkins Bloomberg School of Public Health,Department of Environmental Health Sciences
Bacterial chemotaxis can enhance the bioremediation of contaminants in aqueous and subsurface environments if the contaminant is a chemoattractant that the bacteria degrade. The process can be promoted by traveling bands of chemotactic bacteria that form due to metabolism-generated gradients in chemoattractant concentration. We developed a multiple-relaxation-time (MRT) lattice-Boltzmann method (LBM) to model chemotaxis, because LBMs are well suited to model reactive transport in the complex geometries that are typical for subsurface porous media. This MRT-LBM can attain a better numerical stability than its corresponding single-relaxation-time LBM. We performed simulations to investigate the effects of substrate diffusion, initial bacterial concentration, and hydrodynamic dispersion on the formation, shape, and propagation of bacterial bands. Band formation requires a sufficiently high initial number of bacteria and a small substrate diffusion coefficient. Uniform flow does not affect the bands while shear flow does. Bacterial bands can move both upstream and downstream when the flow velocity is small. However, the bands disappear once the velocity becomes too large due to hydrodynamic dispersion. Generally bands can only be observed if the dimensionless ratio between the chemotactic sensitivity coefficient and the effective diffusion coefficient of the bacteria exceeds a critical value, that is, when the biased movement due to chemotaxis overcomes the diffusion-like movement due to the random motility and hydrodynamic dispersion.
机构:
Univ Fed Rio De Janeiro, Inst Fis, CP 68528, BR-21941972 Rio De Janeiro, RJ, BrazilUniv Fed Rio De Janeiro, Inst Fis, CP 68528, BR-21941972 Rio De Janeiro, RJ, Brazil
Magacho, B.
Tavares, H. S.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Fed Rio De Janeiro, Inst Fis, CP 68528, BR-21941972 Rio De Janeiro, RJ, BrazilUniv Fed Rio De Janeiro, Inst Fis, CP 68528, BR-21941972 Rio De Janeiro, RJ, Brazil
Tavares, H. S.
Moriconi, L.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Fed Rio De Janeiro, Inst Fis, CP 68528, BR-21941972 Rio De Janeiro, RJ, BrazilUniv Fed Rio De Janeiro, Inst Fis, CP 68528, BR-21941972 Rio De Janeiro, RJ, Brazil
Moriconi, L.
Loureiro, J. B. R.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Fed Rio De Janeiro, Programa Engn Mecan, Coordenacao Programas Posgrad Engn, CP 68503, BR-21945970 Rio De Janeiro, RJ, BrazilUniv Fed Rio De Janeiro, Inst Fis, CP 68528, BR-21941972 Rio De Janeiro, RJ, Brazil
机构:
Inst Appl Phys & Computat Math, Natl Key Lab Computat Phys, Beijing 100088, Peoples R China
Peking Univ, Coll Engn, MOE Key Ctr High Energy Dens Phys Simulat, Ctr Appl Phys & Technol, Beijing 100871, Peoples R China
Beijing Inst Technol, State Key Lab Explos Sci & Technol, Beijing 100081, Peoples R ChinaInst Appl Phys & Computat Math, Natl Key Lab Computat Phys, Beijing 100088, Peoples R China
Xu, Aiguo
Lin, Chuandong
论文数: 0引用数: 0
h-index: 0
机构:
China Univ Min & Technol, State Key Lab GeoMech & Deep Underground Engn, Beijing 100083, Peoples R ChinaInst Appl Phys & Computat Math, Natl Key Lab Computat Phys, Beijing 100088, Peoples R China
Lin, Chuandong
Zhang, Guangcai
论文数: 0引用数: 0
h-index: 0
机构:
Inst Appl Phys & Computat Math, Natl Key Lab Computat Phys, Beijing 100088, Peoples R China
Beijing Inst Technol, State Key Lab Explos Sci & Technol, Beijing 100081, Peoples R China
Chinese Acad Sci, Inst Theoret Phys, State Key Lab Theoret Phys, Beijing 100190, Peoples R ChinaInst Appl Phys & Computat Math, Natl Key Lab Computat Phys, Beijing 100088, Peoples R China
Zhang, Guangcai
Li, Yingjun
论文数: 0引用数: 0
h-index: 0
机构:
China Univ Min & Technol, State Key Lab GeoMech & Deep Underground Engn, Beijing 100083, Peoples R ChinaInst Appl Phys & Computat Math, Natl Key Lab Computat Phys, Beijing 100088, Peoples R China