Computation of the influence of chemical substitution on the pKa of pyridine using semiempirical and ab initio methods

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作者
I-Jen Chen
Alexander D. MacKerell Jr
机构
[1] Department of Pharmaceutical Sciences,
[2] School of Pharmacy,undefined
[3] University of Maryland,undefined
[4] 20 N. Pine Street,undefined
[5] Baltimore,undefined
[6] MD 21201,undefined
[7] USA,undefined
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Key words: pKa– Quantum mechanical – Pyridine – Semiempirical – Ab initio;
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摘要
The physical properties of chemicals are strongly influenced by their protonation state, affecting, for example, solubility or hydrogen-bonding characteristics. The ability to accurately calculate protonation states in the form of pKas is, therefore, desirable. Calculations of pKa changes in a series of substituted pyridines are presented. Computations were performed using both ab initio and semiempirical approaches, including free energies of solvation via reaction-field models. The selected methods are readily accessible with respect to both software and computational feasibility. Comparison of calculated and experimental pKas shows the experimental trends to be reasonably reproduced by the computations with root-mean-square differences ranging from 1.22 to 4.14 pKa units. Of the theoretical methods applied the best agreement occurred using the second-order Møller–Plesset/6-31G(d)/isodensity surface polarized continuum solvation model, while the more computationally accessible Austin model 1/Solvent model 2 (SM2) approach yielded results similar to the ab initio methods. Analysis of component contributions to the calculated pKas indicates the largest source of error to be associated with the free energies of solvation of the protonated species followed by the gas-phase protonation energies; while the latter may be improved via the use of higher levels of theory, enhancements in the former require improvements in the solvation models. The inclusion of alternate minimum in the computation of pKas is also indicated to contribute to differences between experimental and calculated pKa values.
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页码:483 / 494
页数:11
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