Enzyme-catalysed [6+4] cycloadditions in the biosynthesis of natural products

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作者
Bo Zhang
Kai Biao Wang
Wen Wang
Xin Wang
Fang Liu
Jiapeng Zhu
Jing Shi
Ling Yu Li
Hao Han
Kuang Xu
Hong Yun Qiao
Xiao Zhang
Rui Hua Jiao
Kendall N. Houk
Yong Liang
Ren Xiang Tan
Hui Ming Ge
机构
[1] Nanjing University,State Key Laboratory of Pharmaceutical Biotechnology, Institute of Functional Biomolecules, School of Life Sciences
[2] Nanjing University,State Key Laboratory of Coordination Chemistry, Jiangsu Key Laboratory of Advanced Organic Materials, School of Chemistry and Chemical Engineering
[3] Nanjing University of Chinese Medicine,State Key Laboratory Cultivation Base for TCM Quality and Efficacy, School of Life Sciences and Medicine
[4] University of California,Department of Chemistry and Biochemistry
[5] Los Angeles,undefined
来源
Nature | 2019年 / 568卷
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摘要
Pericyclic reactions are powerful transformations for the construction of carbon–carbon and carbon–heteroatom bonds in organic synthesis. Their role in biosynthesis is increasingly apparent, and mechanisms by which pericyclases can catalyse reactions are of major interest1. [4+2] cycloadditions (Diels–Alder reactions) have been widely used in organic synthesis2 for the formation of six-membered rings and are now well-established in biosynthesis3–6. [6+4] and other ‘higher-order’ cycloadditions were predicted7 in 1965, and are now increasingly common in the laboratory despite challenges arising from the generation of a highly strained ten-membered ring system8,9. However, although enzyme-catalysed [6+4] cycloadditions have been proposed10–12, they have not been proven to occur. Here we demonstrate a group of enzymes that catalyse a pericyclic [6+4] cycloaddition, which is a crucial step in the biosynthesis of streptoseomycin-type natural products. This type of pericyclase catalyses [6+4] and [4+2] cycloadditions through a single ambimodal transition state, which is consistent with previous proposals11,12. The [6+4] product is transformed to a less stable [4+2] adduct via a facile Cope rearrangement, and the [4+2] adduct is converted into the natural product enzymatically. Crystal structures of three pericyclases, computational simulations of potential energies and molecular dynamics, and site-directed mutagenesis establish the mechanism of this transformation. This work shows how enzymes are able to catalyse concerted pericyclic reactions involving ambimodal transition states.
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页码:122 / 126
页数:4
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