Inferring chromatin accessibility during murine hematopoiesis through phylogenetic analysis

被引:0
|
作者
Kanako O. Koyanagi
机构
[1] Hokkaido University,Faculty of Information Science and Technology
来源
关键词
Cell differentiation; Chromatin accessibility; Phylogenetic analysis; Ancestral state estimation; Murine hematopoiesis;
D O I
暂无
中图分类号
学科分类号
摘要
引用
收藏
相关论文
共 50 条
  • [1] Inferring chromatin accessibility during murine hematopoiesis through phylogenetic analysis
    Koyanagi, Kanako O.
    BMC RESEARCH NOTES, 2023, 16 (01)
  • [2] Single Cell Chromatin Accessibility Atlas During Murine Kidney Injury and Repair
    Muto, Yoshiharu
    Dixon, Eryn E.
    Wu, Haojia
    Ledru, Nicolas
    Wilson, Parker C.
    Kirita, Yuhei
    Humphreys, Benjamin D.
    JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2022, 33 (11): : 362 - 362
  • [3] Lisa: inferring transcriptional regulators through integrative modeling of public chromatin accessibility and ChIP-seq data
    Qian Qin
    Jingyu Fan
    Rongbin Zheng
    Changxin Wan
    Shenglin Mei
    Qiu Wu
    Hanfei Sun
    Myles Brown
    Jing Zhang
    Clifford A. Meyer
    X. Shirley Liu
    Genome Biology, 21
  • [4] Lisa: inferring transcriptional regulators through integrative modeling of public chromatin accessibility and ChIP-seq data
    Qin, Qian
    Fan, Jingyu
    Zheng, Rongbin
    Wan, Changxin
    Mei, Shenglin
    Wu, Qiu
    Sun, Hanfei
    Brown, Myles
    Zhang, Jing
    Meyer, Clifford A.
    Liu, X. Shirley
    GENOME BIOLOGY, 2020, 21 (01)
  • [5] COMPARATIVE ANALYSIS OF CHROMATIN ACCESSIBILITY DURING CHONDROGENESIS AND HIP CHONDROCYTES
    Barter, Matt J.
    Soul, Jamie
    Cheung, Kat
    Panagiotopoulos, Andreas
    Deehan, David
    Young, David A.
    OSTEOARTHRITIS AND CARTILAGE, 2024, 32 : S485 - S486
  • [6] The chromatin accessibility complex: Chromatin dynamics through nucleosome sliding
    Becker, PB
    COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY, 2004, 69 : 281 - 287
  • [7] The Chromatin Accessibility Complex: Chromatin Dynamics through Nucleosome Sliding
    Becker, P. B.
    EPIGENETICS, 2004, 69 : 281 - 287
  • [8] Generation and resolution of bivalent chromatin during hematopoiesis
    Ghosh, Amalendu
    De, Supriyo
    Bell, Jeremiah
    Weber, Brittany
    Wood, William
    Becker, Kevin
    Sen, Jyoti
    Bhandoola, Avinash
    Sen, Ranjan
    JOURNAL OF IMMUNOLOGY, 2014, 192
  • [9] Frizzled5 controls murine intestinal epithelial cell plasticity through organization of chromatin accessibility
    Deng, Lu
    He, Xi C.
    Chen, Shiyuan
    Zhang, Ning
    Deng, Fengyan
    Scott, Allison
    He, Yanfeng
    Tsuchiya, Dai
    Smith, Sarah E.
    Epp, Michael
    Malloy, Seth
    Liu, Fang
    Hembree, Mark
    Mu, Qinghui
    Haug, Jeffrey S.
    Malagola, Ermanno
    Hassan, Huzaifa
    Petentler, Kaitlyn
    Egidy, Rhonda
    Maddera, Lucinda
    Russell, Jonathon
    Wang, Yan
    Li, Hua
    Zhao, Chongbei
    Perera, Anoja
    Wang, Timothy C.
    Kuo, Calvin J.
    Li, Linheng
    DEVELOPMENTAL CELL, 2025, 60 (03)
  • [10] Inferring Cell Differentiation Processes Based on Phylogenetic Analysis of Genome-Wide Epigenetic Information: Hematopoiesis as a Model Case
    Koyanagi, Kanako O.
    GENOME BIOLOGY AND EVOLUTION, 2015, 7 (03): : 699 - 705