The regulatory mechanism of LncRNA-mediated ceRNA network in osteosarcoma

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作者
Chengsen Lin
Jifeng Miao
Juliang He
Wenyu Feng
Xianxiang Chen
Xiaohong Jiang
Jianhong Liu
Boxiang Li
Qian Huang
Shijie Liao
Yun Liu
机构
[1] The First Affiliated Hospital of Guangxi Medical University,Department of Orthopedics
[2] The Children’s Hospital of Guangxi Zhuang Autonomous Region,Department of Orthopedics
[3] Maternal and Child Health Hospital of Guangxi Zhuang Autonomous Region,Department of Bone and Soft Tissue Neurosurgery
[4] Affiliated Tumor Hospital of Guangxi Medical University,Department of Orthopedics
[5] Ethnic Hospital of Guangxi Zhuang Autonomous Region,undefined
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Aberrantly expressed lncRNAs have been reported to be closely related to the oncogenesis and development of osteosarcoma. However, the role of a dysregulated lncRNA-miRNA-mRNA network in osteosarcoma in the same individual needs to be further investigated. Whole transcriptome sequencing was performed on the tumour tissues and matched paratumour tissues of three patients with confirmed osteosarcoma. Two divergent lncRNA-miRNA-mRNA regulatory networks were constructed in accordance with their biological significance. The GO and KEGG analysis results of the mRNAs in the two networks revealed that the aberrantly expressed lncRNAs were involved in regulating bone growth and development, epithelial cell proliferation, cell cycle arrest and the N-terminal acetylation of proteins. The survival analysis results of the two networks showed that patients with high expression of GALNT3, FAM91A1, STC2 and SLC7A1 end in poorer prognosis. Likewise, patients with low expression of IGF2, BLCAP, ZBTB47, THRB, PKIA and MITF also had poor prognosis. A subnetwork was then constructed to demonstrate the key genes regulated by aberrantly expressed lncRNAs at the posttranscriptional level via the ceRNA network. Aberrantly expressed lncRNAs in osteosarcoma tissues regulate genes involved in cellular proliferation, differentiation, angiogenesis and the cell cycle via the ceRNA network.
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