Algorithms for computing the double cut and join distance on both gene order and intergenic sizes

被引：0
|
作者：
Guillaume Fertin
Géraldine Jean
Eric Tannier
机构：
[1] Université de Nantes,LS2N UMR CNRS 6004
[2] Institut National de Recherche en Informatique et en Automatique (Inria) Grenoble Rhône-Alpes,CNRS, Laboratoire de Biomètrie et Biologie Evolutive UMR5558
[3] Univ Lyon,undefined
[4] Université Lyon 1,undefined
来源：
Algorithms for Molecular Biology | / 12卷
关键词：
DCJ; Intergenic regions; Genome rearrangements; Algorithms;
D O I：
暂无
中图分类号：
学科分类号：
摘要：
引用
收藏
相关论文
共 16 条
  • [1] Algorithms for computing the double cut and join distance on both gene order and intergenic sizes
    Fertin, Guillaume
    Jean, Geraldine
    Tannier, Eric
    ALGORITHMS FOR MOLECULAR BIOLOGY, 2017, 12
  • [2] Super Short Reversals on Both Gene Order and Intergenic Sizes
    Oliveira, Andre Rodrigues
    Jean, Geraldine
    Fertin, Guillaume
    Dias, Ulisses
    Dias, Zanoni
    ADVANCES IN BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, BSB 2018, 2018, 11228 : 14 - 25
  • [3] Super short operations on both gene order and intergenic sizes
    Andre R. Oliveira
    Géraldine Jean
    Guillaume Fertin
    Ulisses Dias
    Zanoni Dias
    Algorithms for Molecular Biology, 14
  • [4] Sorting by Genome Rearrangements on Both Gene Order and Intergenic Sizes
    Brito, Klairton Lima
    Jean, Geraldine
    Fertin, Guillaume
    Oliveira, Andre Rodrigues
    Dias, Ulisses
    Dias, Zanoni
    JOURNAL OF COMPUTATIONAL BIOLOGY, 2020, 27 (02) : 156 - 174
  • [5] Super short operations on both gene order and intergenic sizes
    Oliveira, Andre R.
    Jean, Geraldine
    Fertin, Guillaume
    Dias, Ulisses
    Dias, Zanoni
    ALGORITHMS FOR MOLECULAR BIOLOGY, 2019, 14 (01)
  • [6] Sorting by Reversals, Transpositions, and Indels on Both Gene Order and Intergenic Sizes
    Brito, Klairton Lima
    Jean, Geraldine
    Fertin, Guillaume
    Oliveira, Andre Rodrigues
    Dias, Ulisses
    Dias, Zanoni
    BIOINFORMATICS RESEARCH AND APPLICATIONS, ISBRA 2019, 2019, 11490 : 28 - 39
  • [7] HP distance via double cut and join distance
    Bergeron, Anne
    Mixtacki, Julia
    Stoye, Jens
    COMBINATORIAL PATTERN MATCHING, 2008, 5029 : 56 - +
  • [8] An improved approximation algorithm for the reversal and transposition distance considering gene order and intergenic sizes
    Brito, Klairton L.
    Oliveira, Andre R.
    Alexandrino, Alexsandro O.
    Dias, Ulisses
    Dias, Zanoni
    ALGORITHMS FOR MOLECULAR BIOLOGY, 2021, 16 (01)
  • [9] An improved approximation algorithm for the reversal and transposition distance considering gene order and intergenic sizes
    Klairton L. Brito
    Andre R. Oliveira
    Alexsandro O. Alexandrino
    Ulisses Dias
    Zanoni Dias
    Algorithms for Molecular Biology, 16
  • [10] Genome Rearrangements on Both Gene Order and Intergenic Regions
    Fertin, Guillaume
    Jean, Geraldine
    Tannier, Eric
    ALGORITHMS IN BIOINFORMATICS, 2016, 9838 : 162 - 173
12