Resolving Anatomical and Functional Structure in Human Brain Organization: Identifying Mesoscale Organization in Weighted Network Representations

被引:43
|
作者
Lohse, Christian [1 ]
Bassett, Danielle S. [2 ,3 ,4 ]
Lim, Kelvin O. [5 ]
Carlson, Jean M. [2 ]
机构
[1] Heidelberg Univ, Kirchhoff Inst Phys, Heidelberg, Germany
[2] Univ Calif Santa Barbara, Dept Phys, Santa Barbara, CA 93106 USA
[3] Univ Calif Santa Barbara, Sage Ctr Study Mind, Santa Barbara, CA 93106 USA
[4] Univ Penn, Dept Bioengn, Philadelphia, PA 19104 USA
[5] Univ Minnesota, Dept Psychiat, Minneapolis, MN 55455 USA
关键词
WHITE-MATTER INTEGRITY; HIERARCHICAL ORGANIZATION; WORKING-MEMORY; SCHIZOPHRENIA; CONNECTIVITY; ARCHITECTURE; ACTIVATION; MODULARITY; MODELS; HEALTH;
D O I
10.1371/journal.pcbi.1003712
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Human brain anatomy and function display a combination of modular and hierarchical organization, suggesting the importance of both cohesive structures and variable resolutions in the facilitation of healthy cognitive processes. However, tools to simultaneously probe these features of brain architecture require further development. We propose and apply a set of methods to extract cohesive structures in network representations of brain connectivity using multi-resolution techniques. We employ a combination of soft thresholding, windowed thresholding, and resolution in community detection, that enable us to identify and isolate structures associated with different weights. One such mesoscale structure is bipartivity, which quantifies the extent to which the brain is divided into two partitions with high connectivity between partitions and low connectivity within partitions. A second, complementary mesoscale structure is modularity, which quantifies the extent to which the brain is divided into multiple communities with strong connectivity within each community and weak connectivity between communities. Our methods lead to multi-resolution curves of these network diagnostics over a range of spatial, geometric, and structural scales. For statistical comparison, we contrast our results with those obtained for several benchmark null models. Our work demonstrates that multi-resolution diagnostic curves capture complex organizational profiles in weighted graphs. We apply these methods to the identification of resolution-specific characteristics of healthy weighted graph architecture and altered connectivity profiles in psychiatric disease.
引用
收藏
页数:17
相关论文
共 50 条
  • [1] Functional Network Organization of the Human Brain
    Power, Jonathan D.
    Cohen, Alexander L.
    Nelson, Steven M.
    Wig, Gagan S.
    Barnes, Kelly Anne
    Church, Jessica A.
    Vogel, Alecia C.
    Laumann, Timothy O.
    Miezin, Fran M.
    Schlaggar, Bradley L.
    Petersen, Steven E.
    NEURON, 2011, 72 (04) : 665 - 678
  • [2] The Anatomical and Functional Organization of the Human Visual Pulvinar
    Arcaro, Michael J.
    Pinsk, Mark A.
    Kastner, Sabine
    JOURNAL OF NEUROSCIENCE, 2015, 35 (27): : 9848 - 9871
  • [3] Community structure in networks of functional connectivity: Resolving functional organization in the rat brain with pharmacological MRI
    Schwarz, Adam J.
    Gozzi, Alessandro
    Bifone, Angelo
    NEUROIMAGE, 2009, 47 (01) : 302 - 311
  • [4] Challenges and future directions for representations of functional brain organization
    Janine Bijsterbosch
    Samuel J. Harrison
    Saad Jbabdi
    Mark Woolrich
    Christian Beckmann
    Stephen Smith
    Eugene P. Duff
    Nature Neuroscience, 2020, 23 : 1484 - 1495
  • [5] Challenges and future directions for representations of functional brain organization
    Bijsterbosch, Janine
    Harrison, Samuel J.
    Jbabdi, Saad
    Woolrich, Mark
    Beckmann, Christian
    Smith, Stephen
    Duff, Eugene P.
    NATURE NEUROSCIENCE, 2020, 23 (12) : 1484 - 1495
  • [6] Plasticity and functional organization of the human brain
    Ward, N
    Frackowiak, R
    INTERNATIONAL JOURNAL OF PSYCHOPHYSIOLOGY, 2004, 54 (1-2) : 1 - 1
  • [7] Functional organization of the transcriptome in human brain
    Oldham, Michael C.
    Konopka, Genevieve
    Iwamoto, Kazuya
    Langfelder, Peter
    Kato, Tadafumi
    Horvath, Steve
    Geschwind, Daniel H.
    NATURE NEUROSCIENCE, 2008, 11 (11) : 1271 - 1282
  • [8] Functional organization of the transcriptome in human brain
    Michael C Oldham
    Genevieve Konopka
    Kazuya Iwamoto
    Peter Langfelder
    Tadafumi Kato
    Steve Horvath
    Daniel H Geschwind
    Nature Neuroscience, 2008, 11 : 1271 - 1282
  • [9] Identifying Individual Differences in the Functional Organization of the Neonatal Brain
    Scheinost, Dustin
    Salehi, Mehraveh
    Constable, R. Todd
    Spann, Marisa
    BIOLOGICAL PSYCHIATRY, 2020, 87 (09) : S82 - S82
  • [10] Identifying Individual Differences in the Functional Organization of the Neonatal Brain
    Scheinost, Dustin
    Salehi, Mehraveh
    Constable, R. Todd
    Spann, Marisa
    NEUROPSYCHOPHARMACOLOGY, 2019, 44 (SUPPL 1) : 415 - 415