Identifying the chromatin accessibility states of oligodendrocytes during development and in disease with scATAC-seq

被引：0
|
作者：
Meijer, M. [1 ]
Agirre, E. [1 ]
Chen, X. [2 ]
Heskol, A. [1 ]
Gezelius, H. [3 ]
Linnarsson, S. [1 ,3 ]
Chang, H. [2 ]
Castelo-Branco, G. [1 ]
机构：
[1] Karolinska Inst, Mol Neurobiol Lab, Dept Med Biochem & Biophys, Stockholm, Sweden
[2] Stanford Univ, Ctr Personal Dynam Regulomes, Stanford, CA 94305 USA
[3] Sci Life Lab, Eukaryot Single Cell Genom Facil, Stockholm, Sweden
来源：
GLIA | 2019年 / 67卷
关键词：
D O I：
暂无
中图分类号：
Q189 [神经科学];
学科分类号：
071006 ;
摘要：
T08-003A
引用
收藏
页码：E293 / E293
页数：1
相关论文
共 50 条
  • [1] A scATAC-seq atlas of chromatin accessibility in axolotl brain regions
    Weimin Feng
    Shuai Liu
    Qiuting Deng
    Sulei Fu
    Yunzhi Yang
    Xi Dai
    Shuai Wang
    Yijin Wang
    Yang Liu
    Xiumei Lin
    Xiangyu Pan
    Shijie Hao
    Yue Yuan
    Ying Gu
    Xiuqing Zhang
    Hanbo Li
    Longqi Liu
    Chuanyu Liu
    Ji-Feng Fei
    Xiaoyu Wei
    Scientific Data, 10
  • [2] A scATAC-seq atlas of chromatin accessibility in axolotl brain regions
    Feng, Weimin
    Liu, Shuai
    Deng, Qiuting
    Fu, Sulei
    Yang, Yunzhi
    Dai, Xi
    Wang, Shuai
    Wang, Yijin
    Liu, Yang
    Lin, Xiumei
    Pan, Xiangyu
    Hao, Shijie
    Yuan, Yue
    Gu, Ying
    Zhang, Xiuqing
    Li, Hanbo
    Liu, Longqi
    Liu, Chuanyu
    Fei, Ji-Feng
    Wei, Xiaoyu
    SCIENTIFIC DATA, 2023, 10 (01)
  • [3] Multiplexed Analysis of Retinal Gene Expression and Chromatin Accessibility using scRNA-Seq and scATAC-Seq
    Weir, Kurt
    Leavey, Patrick
    Santiago, Clayton
    Blackshaw, Seth
    JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2021, (169):
  • [4] Profiling the chromatin landscape of early neurodevelopment using scATAC-seq
    Mannens, C. C. A.
    Hu, L.
    Braun, E. P.
    Lonnerberg, P.
    Linnarsson, S.
    EUROPEAN JOURNAL OF HUMAN GENETICS, 2020, 28 (SUPPL 1) : 758 - 759
  • [5] Depth-corrected multi-factor dissection of chromatin accessibility for scATAC-seq data with PACS
    Miao, Zhen
    Wang, Jianqiao
    Park, Kernyu
    Kuang, Da
    Kim, Junhyong
    NATURE COMMUNICATIONS, 2025, 16 (01)
  • [6] Multiplexed analysis of gene expression and chromatin accessibility of human umbilical cord blood using scRNA-Seq and scATAC-Seq
    Hou, Xianliang
    Wang, Ying-Lan
    Shi, Wei
    Hu, Wenlong
    Zeng, Zhipeng
    Liu, Jiayi
    Li, Lian
    Cai, Wanxia
    Tang, Donge
    Dai, Yong
    MOLECULAR IMMUNOLOGY, 2022, 152 : 207 - 214
  • [7] Integrative scATAC-seq and scRNA-seq analyses map thymic iNKT cell development and identify Cbfβ for its commitment
    Wang, Jie
    Adrianto, Indra
    Subedi, Kalpana
    Liu, Tingting
    Wu, Xiaojun
    Yi, Qijun
    Loveless, Ian
    Yin, Congcong
    Datta, Indrani
    Sant'Angelo, Derek B. B.
    Kronenberg, Mitchell
    Zhou, Li
    Mi, Qing-Sheng
    CELL DISCOVERY, 2023, 9 (01)
  • [8] Integrative scATAC-seq and scRNA-seq analyses map thymic iNKT cell development and identify Cbfβ for its commitment
    Jie Wang
    Indra Adrianto
    Kalpana Subedi
    Tingting Liu
    Xiaojun Wu
    Qijun Yi
    Ian Loveless
    Congcong Yin
    Indrani Datta
    Derek B. Sant’Angelo
    Mitchell Kronenberg
    Li Zhou
    Qing-Sheng Mi
    Cell Discovery, 9
  • [9] Semi-automated IT-scATAC-seq profiles cell-specific chromatin accessibility in differentiation and peripheral blood populations
    Jin, Wei
    Ma, Jingchun
    Rong, Li
    Huang, Shengshuo
    Li, Tuo
    Jin, Guoxiang
    Zhou, Zhongjun
    NATURE COMMUNICATIONS, 2025, 16 (01)
  • [10] Dynamic reprogramming of chromatin accessibility during Drosophilaembryo development
    Sean Thomas
    Xiao-Yong Li
    Peter J Sabo
    Richard Sandstrom
    Robert E Thurman
    Theresa K Canfield
    Erika Giste
    William Fisher
    Ann Hammonds
    Susan E Celniker
    Mark D Biggin
    John A Stamatoyannopoulos
    Genome Biology, 12
12345