Link tracking: Quantifying network flows from qualitative node-link digraphs

被引:13
|
作者
Patten, Bernard C. [1 ]
机构
[1] Univ Georgia, Odum Sch Ecol, Athens, GA 30602 USA
关键词
EcoNet; Environs; Eulerian; Holistic determination; Lagrangian; Link tracking; Microcosms; Oyster model; Particle tracking; Radiocesium; Ukrainian food webs;
D O I
10.1016/j.ecolmodel.2014.09.016
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
This paper gives a possible explanation for how changes in holistic network organization can come to be reflected in changes in mechanistic processes thought to be under local control by organisms and abiota. Most point-contact, or node ((sic))-link (-,->), networks in science are qualitative. Their complexity is great and quantification is difficult. Networks depict wholeness and are models for holism. Mathematically, they are graphs, unweighted when unquantified, and either undirected ((sic); most social networks) or directed ((sic)->(sic); most ecological food webs). Directed graphs are digraphs. The question of this paper is, can unweighted digraphs be used to quantify mass-energy link flows? A methodology, link tracking, is developed to achieve this. Simple paths (no repeated nodes) and cycles in the network are identified. Links for different node pairs are tallied along these pathways, and used to calculate transition probabilities. These are extended to all pathways (direct + indirect) by matrix inversion; the resultant coefficients are used in conjunction with boundary inputs to generate flows. Applied to an ecological stock-and-flow model, empirical measurements lay within 2 times the corresponding link tracking values. This reinforces the intuition that digraph structure and flow function are intimately related, which is the principal general finding of the paper. However, only one "structure-based" parameterization is calculable per digraph by link tracking, whereas many "functional" empirical flows are possible. The meaning of the link tracking values is therefore to be resolved. In discussion, it is hypothesized that link tracking structural flows are basins of attraction - centrally tending mean flows around which realizable empirical flows are constrained by structure to be distributed. The methodology sheds light on previously unexplained results from an early radiotracer study of experimental ecological networks. Uses of link tracking to expand existing knowledge of food webs and other kinds of qualitative networks are considered. (C) 2014 Elsevier B.V. All rights reserved.
引用
收藏
页码:47 / 58
页数:12
相关论文
共 50 条
  • [1] Node, Node-Link, and Node-Link-Group Diagrams: An Evaluation
    Saket, Bahador
    Simonetto, Paolo
    Kobourov, Stephen
    Boerner, Katy
    IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS, 2014, 20 (12) : 2231 - 2240
  • [2] Optimal Virtual Network Embedding: Node-Link Formulation
    Melo, Marcio
    Sargento, Susana
    Killat, Ulrich
    Timm-Giel, Andreas
    Carapinha, Jorge
    IEEE TRANSACTIONS ON NETWORK AND SERVICE MANAGEMENT, 2013, 10 (04): : 356 - 368
  • [3] Tracking Disease Using Small World Network Theory and Matrix and Node-Link Graphics
    Applen, J. D.
    2015 IEEE INTERNATIONAL PROFESSIONAL COMMUNICATION CONFERENCE (IPCC), 2015,
  • [4] Node-link mapping, an asset?
    Melton, Vanessa
    Ledwith, Sue
    ADVANCES IN DUAL DIAGNOSIS, 2016, 9 (01) : 26 - 37
  • [5] Comparing Node-Link and Node-Link-Group Visualizations From An Enjoyment Perspective
    Saket, Bahador
    Scheidegger, Carlos
    Kobourov, Stephen
    COMPUTER GRAPHICS FORUM, 2016, 35 (03) : 41 - 50
  • [6] Comparative Eye Tracking Study on Node-Link Visualizations of Trajectories
    Netzel, Rudolf
    Burch, Michel
    Weiskopf, Daniel
    IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS, 2014, 20 (12) : 2221 - 2230
  • [7] The importance of design in learning from node-link diagrams
    Marije van Amelsvoort
    Jan van der Meij
    Anjo Anjewierden
    Hans van der Meij
    Instructional Science, 2013, 41 : 833 - 847
  • [8] The importance of design in learning from node-link diagrams
    van Amelsvoort, Marije
    van der Meij, Jan
    Anjewierden, Anjo
    van der Meij, Hans
    INSTRUCTIONAL SCIENCE, 2013, 41 (05) : 833 - 847
  • [9] Expressive Authoring of Node-Link Diagrams With Graphies
    Romat, Hugo
    Appert, Caroline
    Pietriga, Emmanuel
    IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS, 2021, 27 (04) : 2329 - 2340
  • [10] Visualizing offscreen elements of node-link diagrams
    Frisch, Mathias
    Dachselt, Raimund
    INFORMATION VISUALIZATION, 2013, 12 (02) : 133 - 162