Feature extraction from terahertz pulses for classification of RNA data via support vector machines

被引:0
|
作者
Yin, Xiaoxia [1 ]
Ng, Brian W. -H.
Fischer, Berrid
Ferguson, Bradley
Mickan, Sainuel P.
Abbott, Derek
机构
[1] Univ Adelaide, Sch Elect & Elect Engn, Ctr Biomed Engn, Adelaide, SA 5005, Australia
[2] Tenix Elect Syst Div, Mawson Lakes, SA 5095, Australia
关键词
terahertz; T-rays; support vector machines; pairwise classification; RNA;
D O I
10.1117/12.695629
中图分类号
TB3 [工程材料学];
学科分类号
0805 ; 080502 ;
摘要
This study investigates binary and multiple classes of classification via support vector machines (SVMs). A couple of groups of two dimensional features are extracted via frequency orientation components, which result in the effective classification of Terahertz (T-ray) pulses for discrimination of RNA data, and various powder samples. For each classification task, a pair of extracted feature vectors from the terahertz signals corresponding to each class is viewed as two coordinates and plotted in the same coordinate system. The current classification method extracts specific features from the Fourier spectrum, without applying an extra feature extractor. This method shows that SVMs can employ conventional feature extraction methods for a T-ray classification task. Moreover, we discuss the challenges faced by this method. A pairwise classification method is applied for the multi-class classification of powder samples. Plots of learning vectors assist in understanding the classification task. which exhibit improved clustering, clear learning margins, and least support vectors. This paper highlights the ability to use a small number of features (2D features) for classification via analyzing the frequency spectrum, which greatly reduces the computation complexity in achieving the preferred classification performance.
引用
收藏
页数:13
相关论文
共 50 条
  • [1] Feature extraction and classification with wavelet transform and support vector machines
    Zhang, SY
    Xue, XR
    Zhang, X
    IGARSS 2005: IEEE INTERNATIONAL GEOSCIENCE AND REMOTE SENSING SYMPOSIUM, VOLS 1-8, PROCEEDINGS, 2005, : 3795 - 3798
  • [2] Source based feature extraction for support vector machines in hyperspectral classification
    Halldorsson, GH
    Benediktsson, JA
    Sveinsson, JR
    IGARSS 2004: IEEE INTERNATIONAL GEOSCIENCE AND REMOTE SENSING SYMPOSIUM PROCEEDINGS, VOLS 1-7: SCIENCE FOR SOCIETY: EXPLORING AND MANAGING A CHANGING PLANET, 2004, : 536 - 539
  • [3] Acute Burn Assessment Using Terahertz Spectroscopic Feature Extraction and Support Vector Machines
    Khani, Mahmoud E.
    Osman, Omar B.
    Harris, Zachery B.
    Zhou, Juin-Wan
    Chen, Andrew
    Singer, Adam J.
    Arbab, M. Hassan
    2021 CONFERENCE ON LASERS AND ELECTRO-OPTICS (CLEO), 2021,
  • [4] Feature Extraction Using Support Vector Machines
    Tajiri, Yasuyuki
    Yabuwaki, Ryosuke
    Kitamura, Takuya
    Abe, Shigeo
    NEURAL INFORMATION PROCESSING: MODELS AND APPLICATIONS, PT II, 2010, 6444 : 108 - 115
  • [5] ECG feature extraction and classification using wavelet transform and support vector machines
    Zhao, QB
    Zhang, LQ
    PROCEEDINGS OF THE 2005 INTERNATIONAL CONFERENCE ON NEURAL NETWORKS AND BRAIN, VOLS 1-3, 2005, : 1089 - 1092
  • [6] Feature extraction and classification of tumor based on wavelet package and support vector machines
    Wang, Shulin
    Wang, Ji
    Chen, Huowang
    Li, Shutao
    ADVANCES IN KNOWLEDGE DISCOVERY AND DATA MINING, PROCEEDINGS, 2007, 4426 : 871 - +
  • [7] Massive data classification via unconstrained support vector machines
    Mangasarian, O. L.
    Thompson, M. E.
    JOURNAL OF OPTIMIZATION THEORY AND APPLICATIONS, 2006, 131 (03) : 315 - 325
  • [8] Massive Data Classification via Unconstrained Support Vector Machines
    O. L. Mangasarian
    M. E. Thompson
    Journal of Optimization Theory and Applications, 2006, 131 : 315 - 325
  • [9] Fuzzy Rules Extraction from Support Vector Machines for Multi-class Classification with Feature Selection
    Chaves, Adriana da Costa F.
    Vellasco, Marley
    Tanscheit, Ricardo
    ADVANCES IN NEURO-INFORMATION PROCESSING, PT II, 2009, 5507 : 386 - 393
  • [10] Sensitivity of Support Vector Machines to Random Feature Selection in Classification of Hyperspectral Data
    Waske, Bjoern
    van der Linden, Sebastian
    Benediktsson, Jon Atli
    Rabe, Andreas
    Hostert, Patrick
    IEEE TRANSACTIONS ON GEOSCIENCE AND REMOTE SENSING, 2010, 48 (07): : 2880 - 2889