Topological analysis of aromatic halogen/hydrogen bonds by electron charge density and electrostatic potentials

被引:58
|
作者
Duarte, Dario J. R. [2 ]
de las Vallejos, Margarita M. [2 ]
Peruchena, Nelida M. [1 ,2 ]
机构
[1] Univ Tecnol Nacl, Fac Reg Resistencia, RA-3500 Resistencia, Chaco, Argentina
[2] Univ Nacl Nordeste, Dept Quim, Lab Estructura Mol & Propiedades,Area Quim Fis, Fac Ciencias Exactas & Nat & Agrimensura, RA-3400 Corrientes, Argentina
关键词
AIM; Charge density; Halogen bond; Laplacian; Molecular electrostatic potentials; CENTER-DOT-O; HYDROGEN-BOND; AB-INITIO; HALOGEN BONDS; LAPLACIAN; COMPLEXES; MOLECULES; ATOMS; DERIVATIVES; STRENGTH;
D O I
10.1007/s00894-009-0558-2
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In this work, the intermolecular distribution of the electronic charge density in the aromatic hydrogen/halogen bonds is studied within the framework of the atoms in molecules (AIM) theory and the molecular electrostatic potentials (MEP) analysis. The study is carried out in nine complexes formed between benzene and simple lineal molecules, where hydrogen, fluorine and chlorine atoms act as bridge atoms. All the results are obtained at MP2 level theory using cc-pVTZ basis set. Attention is focused on topological features observed at the intermolecular region such as bond, ring and cage critical points of the electron density, as well as the bond path, the gradient of the density maps, molecular graphs and interatomic surfaces. The strength of the interaction increases in the following order: F center dot center dot center dot pi < Cl center dot center dot center dot pi < H center dot center dot center dot pi. Our results show that the fluorine atom has the capability to interact with the pi-cloud to form an aromatic halogen bond, as long as the donor group is highly electron withdrawing. The Laplacian topology allows us to state that the halogen atoms can act as nucleophiles as well as electrophiles, showing clearly their dual character.
引用
收藏
页码:737 / 748
页数:12
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