Molecular docking, Hirshfeld surface, structural, spectroscopic, electronic, NLO and thermodynamic analyses on novel hybrid compounds containing pyrazole and coumarin cores

被引:76
|
作者
Sert, Yusuf [1 ,2 ]
Gumus, Mehmet [3 ,4 ]
Gokce, Halil [5 ]
Kani, Ibrahim [6 ]
Koca, Irfan [3 ]
机构
[1] Bozok Univ, Fac Art & Sci, Dept Phys, Yozgat, Turkey
[2] Bozok Univ, Sorgun Vocat Sch, Yozgat, Turkey
[3] Bozok Univ, Fac Art & Sci, Dept Chem, Yozgat, Turkey
[4] Bozok Univ, Akdagmadeni Hlth Coll, Yozgat, Turkey
[5] Giresun Univ, Vocat Sch Hlth Serv, Giresun, Turkey
[6] Anadolu Univ, Fac Sci, Dept Chem, Eskisehir, Turkey
关键词
Hirshfeld surface analysis; Molecular docking study; Spectral analysis; Pyrazole; Coumarin; DENSITY-FUNCTIONAL THEORY; FT-RAMAN; CRYSTAL-STRUCTURE; DFT CALCULATIONS; HOMO-LUMO; AB-INITIO; IR; SPECTRA; NMR; NBO;
D O I
10.1016/j.molstruc.2018.06.069
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The target compound 3-(3-(4-chlorobenzoyl)-1-phenyl-1H-pyrazole-5-carbonyl)-7-methoxy-2H-chromen-2-one was characterized by FT-IR, Laser-Raman, NMR chemical shift, UV-Vis. and single-crystal X-Ray diffraction spectroscopic techniques. The molecular geometric structure, Hirshfeld surface, HOMOLUMO, molecular electrostatic potential (MEP), non-linear optical, atomic charges, molecular docking and thermodynamic analyses were theoretically investigated to support the obtained data with experimental studies. The theoretical researches and evaluations were performed by DFT/B3LYP functional at the 6-311++G(d,p) basis set in the ground state of the compound. The assignments of computed harmonic vibrational wavenumbers were determined in terms of potential energy distribution (PED) analysis. Hirshfeld surface analysis was studied to examine intermolecular interactions in crystal packing of the compound. The experimental results on molecular geometry and spectral results were showed that the correlation between experimental and theoretical data is in good agreement. Additionally, for molecular docking study, macromolecule-ligand interactions between 3-(3-(4-chlorobenzoyl)-1-phenyl-1H-pyrazole-5-carbonyl)-7-methoxy-2H-chromen-2-one and interleukin-6 (IL-6) (PDB ID: 4NI9) were investigated by using AutoDock Vina program. All results related to title compound were evaluated in detail. (C) 2018 Elsevier B.V. All rights reserved.
引用
收藏
页码:850 / 866
页数:17
相关论文
共 50 条
  • [1] Theoretical (Hirshfeld surface, molecular docking, structural, electronic properties, NBO and NLO analyses) and spectroscopic studies of 6-chloro-2-oxindole in monomeric and dimeric forms
    Isik, Ilknur Baldan
    Sagdinc, Seda Gunesdogdu
    JOURNAL OF MOLECULAR STRUCTURE, 2021, 1245
  • [2] Computational, spectroscopic, Hirshfeld surface, electronic state and molecular docking studies on phthalic anhydride
    Fatima, Aysha
    Khanum, Ghazala
    Sharma, Arun
    Garima, Km
    Savita, Sandhya
    Verma, Indresh
    Siddiqui, Nazia
    Javed, Saleem
    JOURNAL OF MOLECULAR STRUCTURE, 2022, 1249
  • [3] Solvent effects on spectroscopic, electronic, and topological analyses, Hirshfeld surface, ADME, and molecular docking studies on antiviral pyridine carboxamide derivatives
    Esme, Asli
    Kwiatek, Dorota
    Hnatejko, Zbigniew
    JOURNAL OF MOLECULAR LIQUIDS, 2024, 396
  • [4] Spectroscopic, molecular structure, electronic, Hirshfeld surface, molecular docking, and thermodynamic investigations of trans-4-hydroxy-L-proline by DFT method
    Fatima, Aysha
    Singh, Meenakshi
    Agarwal, Neha
    Verma, Indresh
    Butcher, Ray J.
    Siddiqui, Nazia
    Javed, Saleem
    JOURNAL OF MOLECULAR LIQUIDS, 2021, 343
  • [5] Hirshfeld Surface, Molecular Docking Study, Spectroscopic Characterization and NLO Profile of 2-Methoxy-4,6-Diphenylnicotinonitrile
    Gokce, Halil
    Sert, Yusuf
    Alpaslan, Gokhan
    El-Azab, Adel S.
    Alanazi, Mohammed M.
    Al-Agamy, Mohamed H. M.
    Abdel-Aziz, Alaa A. -M.
    CHEMISTRYSELECT, 2019, 4 (33): : 9857 - 9870
  • [6] Crystal structure, Hirshfeld surface, spectroscopic analyses, electronic properties, NLO profile and thermochemical study of an antispasmodic agent trimebutine
    Karaboyaci, Mustafa
    Gokce, Halil
    Alpaslan, Gokhan
    Ozturk, Nuri
    JOURNAL OF MOLECULAR STRUCTURE, 2020, 1199
  • [7] Structural, vibrational, electronic, NLO and molecular docking analyses of two novel Cu(II) and Pd(II) complexes with pyridine and oxadiazole coordination
    Gokce, Halil
    Bahceli, Semiha
    Alpaslan, Gokhan
    INORGANIC CHEMISTRY COMMUNICATIONS, 2024, 168
  • [8] Experimental Spectroscopic, Quantum Computational, Hirshfeld Surface, Molecular Docking, and Electronic Excitation Studies on an Antibiotic Agent: SDZ
    Kumar, Mukesh
    Fatima, Aysha
    Singh, Meenakshi
    Verma, Indresh
    Khanum, Ghazala
    Muthu, S.
    Althubeiti, Khaled
    Abualnaja, Khamael M.
    Ahmad, Musheer
    Siddiqui, Nazia
    Javed, Saleem
    POLYCYCLIC AROMATIC COMPOUNDS, 2023, 43 (04) : 3122 - 3146
  • [9] Spectroscopic identification, structural features, Hirshfeld surface analysis and molecular docking studies on stiripentol: An orphan antiepileptic drug
    Almutairi, Maha S.
    Leenaraj, D. R.
    Ghabbour, Hazem A.
    Joe, I. Hubert
    Attia, Mohamed I.
    JOURNAL OF MOLECULAR STRUCTURE, 2019, 1180 : 110 - 118
  • [10] Spectroscopic investigations, hirshfeld surface analysis, anticancer and molecular docking studies of new novel NLO 3-hydroxy-3′,4′,5,7-tetramethoxyflavone
    Chitra, S. Valli
    Sankar, A.
    Parimala, K.
    JOURNAL OF THE INDIAN CHEMICAL SOCIETY, 2023, 100 (05)