Multiple Alignment of Contact Maps

被引:0
|
作者
Jain, Brijnesh J. [1 ]
Stehr, Henning [2 ]
Lappe, Michael [2 ]
Obermayer, Klaus [1 ]
机构
[1] Berlin Univ Technol, Dept Elect Engn & Comp Sci, Berlin, Germany
[2] Max Planck Inst Mol Genet, Berlin, Germany
关键词
ALGORITHM;
D O I
暂无
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
We show that multiple structure alignment (MStA) using contact maps is equivalent to the problem of f nding a sample mean of contact maps. From this result, we derive a subgradient method for solving the MStA method. Experiments show that the proposed algorithm is a f exible alignment method that provides an excellent tradeoff between accuracy and speed.
引用
收藏
页码:2281 / +
页数:3
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