Carbohydrate-Based Macromolecular Crowding-Induced Stabilization of Proteins: Towards Understanding the Significance of the Size of the Crowder

被引:32
|
作者
Shahid, Sumra [1 ]
Hasan, Ikramul [2 ]
Ahmad, Faizan [1 ]
Hassan, Md Imtaiyaz [1 ]
Islam, Asimul [1 ]
机构
[1] Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi 110025, India
[2] Al Baha Univ, Fac Appl Med Sci, Dept Basic Med Sci, POB 1988, Al Baha 65411, Saudi Arabia
关键词
carbohydrate-based macromolecular crowder; protein folding; thermodynamic stability; crowder size; excluded volume; EXCLUDED-VOLUME; HINDERED DIFFUSION; THERMAL STABILIZATION; BIOCHEMICAL REACTIONS; CATALYZED HYDROLYSIS; STABILITY PARAMETERS; FOLDING LANDSCAPE; GLOBULAR-PROTEINS; UNFOLDED PROTEIN; ENZYME-KINETICS;
D O I
10.3390/biom9090477
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
There are a large number of biomolecules that are accountable for the extremely crowded intracellular environment, which is totally different from the dilute solutions, i.e., the idealized conditions. Such crowded environment due to the presence of macromolecules of different sizes, shapes, and composition governs the level of crowding inside a cell. Thus, we investigated the effect of different sizes and shapes of crowders (ficoll 70, dextran 70, and dextran 40), which are polysaccharide in nature, on the thermodynamic stability, structure, and functional activity of two model proteins using UV-Vis spectroscopy and circular dichroism techniques. We observed that (a) the extent of stabilization of alpha-lactalbumin and lysozyme increases with the increasing concentration of the crowding agents due to the excluded volume effect and the small-sized and rod-shaped crowder, i.e., dextran 40 resulted in greater stabilization of both proteins than dextran 70 and ficoll 70; (b) structure of both the proteins remains unperturbed; and (c) enzymatic activity of lysozyme decreases with the increasing concentration of the crowder.
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页数:23
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