Guilt by association: Contextual information in genome analysis

被引:129
作者
Aravind, L [1 ]
机构
[1] Natl Lib Med, Natl Ctr Biotechnol Informat, NIH, Bethesda, MD 20894 USA
关键词
D O I
10.1101/gr.10.8.1074
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
[No abstract available]
引用
收藏
页码:1074 / 1077
页数:4
相关论文
共 19 条
[1]   Conserved domains in DNA repair proteins and evolution of repair systems [J].
Aravind, L ;
Walker, DR ;
Koonin, EV .
NUCLEIC ACIDS RESEARCH, 1999, 27 (05) :1223-1242
[2]   DNA-binding proteins and evolution of transcription regulation in the archaea [J].
Aravind, L ;
Koonin, EV .
NUCLEIC ACIDS RESEARCH, 1999, 27 (23) :4658-4670
[3]   Exploring the new world of the genome with DNA microarrays [J].
Brown, PO ;
Botstein, D .
NATURE GENETICS, 1999, 21 (Suppl 1) :33-37
[4]   Conservation of gene order: a fingerprint of proteins that physically interact [J].
Dandekar, T ;
Snel, B ;
Huynen, M ;
Bork, P .
TRENDS IN BIOCHEMICAL SCIENCES, 1998, 23 (09) :324-328
[5]   Protein interaction maps for complete genomes based on gene fusion events [J].
Enright, AJ ;
Iliopoulos, I ;
Kyrpides, NC ;
Ouzounis, CA .
NATURE, 1999, 402 (6757) :86-90
[6]   Who's your neighbor? New computational approaches for functional genomics [J].
Galperin, MY ;
Koonin, EV .
NATURE BIOTECHNOLOGY, 2000, 18 (06) :609-613
[7]   The role of human MBF1 as a transcriptional coactivator [J].
Kabe, Y ;
Goto, M ;
Shima, D ;
Imai, T ;
Wada, T ;
Morohashi, K ;
Shirakawa, M ;
Hirose, S ;
Handa, H .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1999, 274 (48) :34196-34202
[8]   Protein fold recognition using sequence profiles and its application in structural genomics [J].
Koonin, EV ;
Wolf, YI ;
Aravind, L .
ADVANCES IN PROTEIN CHEMISTRY, VOL 54, 2000, 54 :245-275
[9]   A combined algorithm for genome-wide prediction of protein function [J].
Marcotte, EM ;
Pellegrini, M ;
Thompson, MJ ;
Yeates, TO ;
Eisenberg, D .
NATURE, 1999, 402 (6757) :83-86
[10]   Detecting protein function and protein-protein interactions from genome sequences [J].
Marcotte, EM ;
Pellegrini, M ;
Ng, HL ;
Rice, DW ;
Yeates, TO ;
Eisenberg, D .
SCIENCE, 1999, 285 (5428) :751-753