RETRACTED: Identification of Cigarette Smoking-Related Novel Biomarkers in Lung Adenocarcinoma (Retracted Article)
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作者:
Zhang, Yuan
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Zhenhai Hosp Tradit Chinese Med, Dept Resp Med, Ningbo 315000, Zhejiang, Peoples R ChinaZhenhai Hosp Tradit Chinese Med, Dept Resp Med, Ningbo 315000, Zhejiang, Peoples R China
Zhang, Yuan
[1
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Wang, Qiong
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Zhenhai Hosp Tradit Chinese Med, Dept Resp Med, Ningbo 315000, Zhejiang, Peoples R ChinaZhenhai Hosp Tradit Chinese Med, Dept Resp Med, Ningbo 315000, Zhejiang, Peoples R China
Wang, Qiong
[1
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Zhu, Ting
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Zhenhai Hosp Tradit Chinese Med, Dept Resp Med, Ningbo 315000, Zhejiang, Peoples R ChinaZhenhai Hosp Tradit Chinese Med, Dept Resp Med, Ningbo 315000, Zhejiang, Peoples R China
Zhu, Ting
[1
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Chen, Hui
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机构:
Zhejiang Chinese Med Univ, Hangzhou Xiaoshan Hosp Tradit Chinese Med, Dept Prevent Med Tradit Chinese Med, Jiangnan Hosp, Hangzhou 310000, Zhejiang, Peoples R ChinaZhenhai Hosp Tradit Chinese Med, Dept Resp Med, Ningbo 315000, Zhejiang, Peoples R China
Chen, Hui
[2
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机构:
[1] Zhenhai Hosp Tradit Chinese Med, Dept Resp Med, Ningbo 315000, Zhejiang, Peoples R China
[2] Zhejiang Chinese Med Univ, Hangzhou Xiaoshan Hosp Tradit Chinese Med, Dept Prevent Med Tradit Chinese Med, Jiangnan Hosp, Hangzhou 310000, Zhejiang, Peoples R China
Objective. The aims of this study were to screen the gene mutations that are able to predict the risk of cigarette smoking-related lung adenocarcinoma (LUAD) and to evaluate its prognostic significance. Methods. Clinical data and genetic information were retrieved from the TCGA database, and the patients with LUAD were divided into three groups including never smoking, light smoking, and heavy smoking according to cigarette smoking dose. Differentially mutated genes (DMGs) of each group were analyzed. At the same time, the function of DMGs in three smoking groups was evaluated by GO function and KEGG pathway analysis. The driver genes and protein variation effect of DMGs were performed to further screen key genes. The survival characteristics of the gene expression and mutation of those genes were analyzed and plotted to visualize by the Kaplan-Meier model. Result. The DMGs for different smoking doses were identified. The driver and deleterious mutation in the DMGs were screened and gene interaction network was constructed. The DMGs with driver mutations and deleterious mutations that were associated with the overall survival in the heavy smoking patients were considered as the candidate genes for novel markers of smoking-related LUAD. The final novel risk factor gene was identified as MYH7 and the high express of MYH7 in LUAD correlation with patients' gender, lymph node metastasis, T stage, and clinical stage. Conclusions. In summary, it can be concluded that MYH7 is a novel biomarker for heavy smoking-related LUAD and it is significantly correlated with the prognosis of lung cancer and is related to the clinical characteristics of lung cancer.
机构:
Taian City Cent Hosp, Dept Ultrasonog Ctr, Tai An, Shandong, Peoples R ChinaTaian City Cent Hosp, Dept Ultrasonog Ctr, Tai An, Shandong, Peoples R China
Wang, Haiyan
Huang, Lizhi
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Shenzhen Baoan Peoples Hosp Grp, Dept Thorac Surg, Shenzhen, Peoples R ChinaTaian City Cent Hosp, Dept Ultrasonog Ctr, Tai An, Shandong, Peoples R China
Huang, Lizhi
Chen, Li
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Taian City Cent Hosp, Dept Vasc, Tai An, Shandong, Peoples R ChinaTaian City Cent Hosp, Dept Ultrasonog Ctr, Tai An, Shandong, Peoples R China
Chen, Li
Ji, Jing
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Taian City Cent Hosp, Dept Geriatr, Tai An, Shandong, Peoples R ChinaTaian City Cent Hosp, Dept Ultrasonog Ctr, Tai An, Shandong, Peoples R China
Ji, Jing
Zheng, Yuanyuan
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Taian City Cent Hosp, Dept Radiotherapy, Tai An, Shandong, Peoples R ChinaTaian City Cent Hosp, Dept Ultrasonog Ctr, Tai An, Shandong, Peoples R China
Zheng, Yuanyuan
Wang, Zhen
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机构:
Sun Yat Sen Univ, Canc Ctr, Dept Thorac Oncol, Guangzhou, Peoples R ChinaTaian City Cent Hosp, Dept Ultrasonog Ctr, Tai An, Shandong, Peoples R China
机构:
Alagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, IndiaAlagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, India
Pandi, Jhansi
Arulprakasam, Ajucarmelprecilla
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Alagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, IndiaAlagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, India
Arulprakasam, Ajucarmelprecilla
Dhandapani, Ranjithkumar
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Chimertech Private Ltd, Chennai, Tamil Nadu, IndiaAlagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, India
Dhandapani, Ranjithkumar
Ramanathan, Saikishore
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机构:
Alagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, IndiaAlagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, India
Ramanathan, Saikishore
Thangavelu, Sathiamoorthi
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Alagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, IndiaAlagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, India
Thangavelu, Sathiamoorthi
Chinnappan, Jayaprakash
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机构:
Bharathiar Univ, Dept Bioinformat, Coimbatore, Tamil Nadu, IndiaAlagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, India
Chinnappan, Jayaprakash
Vidhya Rajalakshmi, V.
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Bharathiar Univ, Dept Bioinformat, Coimbatore, Tamil Nadu, IndiaAlagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, India
Vidhya Rajalakshmi, V.
Alghamdi, Saad
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机构:
Umm Al Qura Univ, Fac Appl Med Sci, Lab Med Dept, Mecca, Saudi ArabiaAlagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, India
Alghamdi, Saad
Shesha, Nashwa Talaat
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Hera Gen Hosp, Directorate Hlth Affairs, Mecca, Saudi ArabiaAlagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, India
Shesha, Nashwa Talaat
Prasath, S.
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机构:
Mizan Tepi Univ, Coll Engn & Technol, Dept Mech Engn, Tepi, EthiopiaAlagappa Univ, Dept Microbiol, Med Microbiol Unit, Karaikkudi, Tamil Nadu, India
机构:
Stanford Univ, Stanford METRICS, Meta Res Innovat Ctr, Stanford, CA 94305 USA
Univ Med Ctr Utrecht, Cochrane Netherlands, Utrecht, Netherlands
Univ Med Ctr Utrecht, Julius Ctr Hlth Sci & Primary Care, Utrecht, NetherlandsStanford Univ, Stanford METRICS, Meta Res Innovat Ctr, Stanford, CA 94305 USA
Schuit, Ewoud
Panagiotou, Orestis A.
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机构:
Brown Univ, Sch Publ Hlth, Dept Hlth Serv Policy & Practice, Providence, RI 02912 USAStanford Univ, Stanford METRICS, Meta Res Innovat Ctr, Stanford, CA 94305 USA
Panagiotou, Orestis A.
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Munafo, Marcus R.
Bennett, Derrick A.
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Univ Oxford, Nuffield Dept Populat Hlth, Clin Trial Serv Unit, Oxford, England
Univ Oxford, Nuffield Dept Populat Hlth, Epidemiol Studies Unit, Oxford, EnglandStanford Univ, Stanford METRICS, Meta Res Innovat Ctr, Stanford, CA 94305 USA
Bennett, Derrick A.
Bergen, Andrew W.
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Biorealm, Culver City, CA USAStanford Univ, Stanford METRICS, Meta Res Innovat Ctr, Stanford, CA 94305 USA
Bergen, Andrew W.
David, Sean P.
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机构:
Stanford Univ, Dept Med, Div Primary Care & Populat Hlth, Stanford, CA 94305 USAStanford Univ, Stanford METRICS, Meta Res Innovat Ctr, Stanford, CA 94305 USA
David, Sean P.
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