Multi-property fitting and parameterization of a coarse grained model for aqueous surfactants

被引:402
作者
Shinoda, W.
Devane, R.
Klein, M. L.
机构
[1] Univ Penn, Ctr Mol Modeling, Dept Chem, Philadelphia, PA 19104 USA
[2] Natl Inst Adv Ind Sci & Technol, Res Inst Computat Sci, Tsukuba, Ibaraki 3058568, Japan
关键词
coarse graining; molecular dynamics; polyethylene glycol; surfactant; hydration free energy; surface tension;
D O I
10.1080/08927020601054050
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A new systematic approach to build coarse-grained (CG) molecular models for surfactants/water systems is proposed. A step-by-step approach using several molecular systems for the parameterization makes the CG model versatile and transferable. The intramolecular bond potentials are determined to reproduce the bond and angle distributions obtained from all-atom (AA) molecular dynamics (MD) simulations. A careful choice of the potential function for nonbonded interactions is essential for better structural properties. Density and surface/interfacial tension data are used for parameter fitting, because these thermodynamic properties are of key importance in characterizing the self-organized surfactant structure. Solvation (hydration) and transfer free energies, which play an essential role in determining the partition of solute molecules, are also taken into account in the model.
引用
收藏
页码:27 / 36
页数:10
相关论文
共 39 条
[1]  
Frenkel D., 2002, Understanding Molecular Simulation
[2]   A coarse-graining procedure for flexible polymer chains with bonded and nonbonded interactions [J].
Fukunaga, H ;
Takimoto, J ;
Doi, M .
JOURNAL OF CHEMICAL PHYSICS, 2002, 116 (18) :8183-8190
[3]   X-ray studies on the C(12)EO(2)/water system [J].
Funari, SS ;
Rapp, G .
JOURNAL OF PHYSICAL CHEMISTRY B, 1997, 101 (05) :732-739
[4]   Mobility and elasticity of self-assembled membranes [J].
Goetz, R ;
Gompper, G ;
Lipowsky, R .
PHYSICAL REVIEW LETTERS, 1999, 82 (01) :221-224
[5]   Mesoscopic simulation of cell membrane damage, morphology change and rupture by nonionic surfactants [J].
Groot, RD ;
Rabone, KL .
BIOPHYSICAL JOURNAL, 2001, 81 (02) :725-736
[6]   VMD: Visual molecular dynamics [J].
Humphrey, W ;
Dalke, A ;
Schulten, K .
JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 1996, 14 (01) :33-38
[7]   Multiscale coarse graining of liquid-state systems [J].
Izvekov, S ;
Voth, GA .
JOURNAL OF CHEMICAL PHYSICS, 2005, 123 (13)
[8]   A multiscale coarse-graining method for biomolecular systems [J].
Izvekov, S ;
Voth, GA .
JOURNAL OF PHYSICAL CHEMISTRY B, 2005, 109 (07) :2469-2473
[9]   Nonequilibrium equality for free energy differences [J].
Jarzynski, C .
PHYSICAL REVIEW LETTERS, 1997, 78 (14) :2690-2693
[10]   COMPARISON OF SIMPLE POTENTIAL FUNCTIONS FOR SIMULATING LIQUID WATER [J].
JORGENSEN, WL ;
CHANDRASEKHAR, J ;
MADURA, JD ;
IMPEY, RW ;
KLEIN, ML .
JOURNAL OF CHEMICAL PHYSICS, 1983, 79 (02) :926-935