Probing pathological RNA aggregation with GPU-based coarse-grained simulations

被引:0
|
作者
Hung Nguyen [1 ]
Thirumalai, Dave [1 ]
机构
[1] Univ Texas Austin, Chem, Austin, TX 78712 USA
关键词
D O I
暂无
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
372
引用
收藏
页数:1
相关论文
共 50 条
  • [1] Coarse-Grained Simulations of Peptide Aggregation on Surfaces
    Morriss-Andrews, Alex
    Shea, Joan-Emma
    BIOPHYSICAL JOURNAL, 2014, 106 (02) : 100A - 100A
  • [2] Coarse-Grained Simulations of RNA and DNA Duplexes
    Cragnolini, Tristan
    Derreumaux, Philippe
    Pasquali, Samuela
    JOURNAL OF PHYSICAL CHEMISTRY B, 2013, 117 (27): : 8047 - 8060
  • [3] Coarse-grained dynamic RNA titration simulations
    Pasquali, S.
    Frezza, E.
    Barroso da Silva, F. L.
    INTERFACE FOCUS, 2019, 9 (03)
  • [4] Early stages of clathrin aggregation at a membrane in coarse-grained simulations
    Giani, M.
    den Otter, W. K.
    Briels, W. J.
    JOURNAL OF CHEMICAL PHYSICS, 2017, 146 (15):
  • [5] A polarizable coarse-grained water model for coarse-grained proteins simulations
    Ha-Duong, Tap
    Basdevant, Nathalie
    Borgis, Daniel
    CHEMICAL PHYSICS LETTERS, 2009, 468 (1-3) : 79 - 82
  • [6] Coarse-Grained Model of Disordered RNA for Simulations of Biomolecular Condensates
    Yasuda, Ikki
    von Bulow, Soren
    Tesei, Giulio
    Yamamoto, Eiji
    Yasuoka, Kenji
    Lindorff-Larsen, Kresten
    JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2025, 21 (05) : 2766 - 2779
  • [7] Coarse-Grained and Atomistic MD Simulations of RNA and DNA Folding
    Leuchter, Jessica D.
    Green, Adam T.
    Gilyard, Julian
    Rambarat, Cecilia G.
    Cho, Samuel S.
    ISRAEL JOURNAL OF CHEMISTRY, 2014, 54 (8-9) : 1152 - 1164
  • [8] Insights into aggregation dynamics of NACore peptides from coarse-grained simulations
    Huang, Rui-jing
    Tang, Ran
    Song, Xiang-yan
    Wang, Jing-han
    Chen, Kang
    Tian, Wen-de
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2023, 91 (01) : 16 - 21
  • [9] Simulations of Protein Aggregation: Insights from Atomistic and Coarse-Grained Models
    Morriss-Andrews, Alex
    Shea, Joan-Emma
    JOURNAL OF PHYSICAL CHEMISTRY LETTERS, 2014, 5 (11): : 1899 - 1908
  • [10] Aggregation of chlorophylls on plant thylakoid membranes using coarse-grained simulations
    Saini, Renu
    Ansari, Suleman Jalilahmad
    Debnath, Ananya
    PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2023, 25 (16) : 11356 - 11367