Chakrabartia godavariana gen. nov., sp. nov., a novel member of the family Sphingomonadaceae isolated from the Godavari River, India

被引:2
|
作者
Jani, Kunal [1 ,2 ]
Feng, Guang-Da [3 ]
Zhu, Hong-Hui [3 ]
Prakash, Om [1 ]
Bandal, Jayashree [4 ]
Rale, Vinay [2 ]
Shouche, Yogesh [1 ]
Sharma, Avinash [1 ]
机构
[1] Natl Ctr Cell Sci, Natl Ctr Microbial Resource, Pune 411021, Maharashtra, India
[2] Symbiosis Int, Symbiosis Sch Biol Sci, Pune 412115, Maharashtra, India
[3] Guangdong Inst Microbiol, State Key Lab Appl Microbiol Southern China, Guangdong Prov Key Lab Microbial Culture Collect, Guangdong Microbial Culture Collect Ctr GDMCC, Guangzhou 510070, Guangdong, Peoples R China
[4] KTHM Coll, Dept Microbiol, Nasik, Maharashtra, India
关键词
Godavari river; phospholipid; mass bathing; sym-homospermidine; FAME; 16S rRNA gene; EMENDED DESCRIPTION; COMB; NOV; NOVOSPHINGOBIUM; SPHINGOPYXIS; RECLASSIFICATION; SPHINGOBIUM; BACTERIUM; PROPOSAL; EMENDATION; SEQUENCES;
D O I
10.1099/ijsem.0.003512
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-negative, aerobic, yellow-pigmented, oxidase-positive and rod-shaped bacterium, designated PRB40(T), was isolated from the Godavari River in India during the course of 'Kumbh Mela', the world's largest mass gathering event. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain PRB40(T) formed a lineage within the family Sphingomonadaceae and was distinct from the most closely related genera Sphingorhabdus, Novosphingobiumand Sphingomonas with sequence similarity values <= 95.2 %. Growth of strain PRB40(T) occurred at 10-40 degrees C (optimum 30 degrees C), at pH 6.0-9.0 (pH 7.0) and with 0-0.5 % (w/v) NaCl concentration (0 %). The major respiratory quinone was ubiquinone-10 (Q-10). It contained C-17:1 omega 6c, C-14:0 2-OH, summed feature 3 (C-16: (1)omega 7c and/or C-16: (1)omega 6c) and summed feature 8 (C-18:1 1 omega 7c and/or C-18 : (1)omega 6c) as the major cellular fatty acids. The predominant polar lipids were phospholipid, phosphatidylethanolamine and sphingoglycolipid. It took sym-homospermidine as the major polyamine. The DNA G+C content based on its draft genome sequence was 63.7 mol%. The polyphasic taxonomic analyses indicated that strain PRB40(T) represents a novel species of a novel genus within the family Sphingomonadaceae, for which the name Chakrabartia godavariana gen. nov., sp. nov. is proposed. The type strain of Chakrabartia godavariana is PRB40(T) (=MCC 3406(T) =GDMCC 1.1197(T) =KCTC 52678(T) =LMG 29985(T)).
引用
收藏
页码:2452 / 2458
页数:7
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