Variable selection in multivariate calibration based on clustering of variable concept

被引:23
|
作者
Farrokhnia, Maryam [1 ]
Karimi, Sadegh [2 ]
机构
[1] Bushehr Univ Med Sci, Persian Gulf Marine Biotechnol Res Ctr, Bushehr, Iran
[2] Persian Gulf Univ, Coll Sci, Dept Chem, Bushehr, Iran
关键词
Variable selection; Partial least square; Clustering of variable-partial least square; Self organization map; Interval based partial least square; PARTIAL LEAST-SQUARES; WAVELENGTH INTERVAL SELECTION; NEAR-INFRARED SPECTROSCOPY; DATA DIMENSION REDUCTION; REGRESSION; CLASSIFICATION; ALGORITHMS; PEPTIDES; SPECTRA; MODELS;
D O I
10.1016/j.aca.2015.11.002
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
Recently we have proposed a new variable selection algorithm, based on clustering of variable concept (CLoVA) in classification problem With the same idea, this new concept has been applied to a regression problem and then the obtained results have been compared with conventional variable selection strategies for PLS. The basic idea behind the clustering of variable is that, the instrument channels are clustered into different clusters via clustering algorithms. Then, the spectral data of each cluster are subjected to PLS regression. Different real data sets (Cargill corn, Biscuit dough, ACE QSAR, Soy, and Tablet) have been used to evaluate the influence of the clustering of variables on the prediction performances of PLS. Almost in the all cases, the statistical parameter especially in prediction error shows the superiority of CLoVA-PLS respect to other variable selection strategies. Finally the synergy clustering of variable (sCLoVA-PLS), which is used the combination of cluster, has been proposed as an efficient and modification of CLoVA algorithm. The obtained statistical parameter indicates that variable clustering can split useful part from redundant ones, and then based on informative cluster; stable model can be reached. (C) 2015 Elsevier B.V. All rights reserved.
引用
收藏
页码:70 / 81
页数:12
相关论文
共 50 条
  • [1] Variable interaction network based variable selection for multivariate calibration
    Rao, Raghuraj
    Lakshminarayanan, S.
    ANALYTICA CHIMICA ACTA, 2007, 599 (01) : 24 - 35
  • [2] A novel variable selection method based on stability and variable permutation for multivariate calibration
    Chen, Junming
    Yang, Chunhua
    Zhu, Hongqiu
    Li, Yonggang
    Gui, Weihua
    CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 2018, 182 : 188 - 201
  • [3] A hybrid variable selection strategy based on continuous shrinkage of variable space in multivariate calibration
    Yun, Yong-Huan
    Bin, Jun
    Liu, Dong-Li
    Xu, Lin
    Yan, Ting-Liang
    Cao, Dong-Sheng
    Xu, Qing-Song
    ANALYTICA CHIMICA ACTA, 2019, 1058 : 58 - 69
  • [4] Variable Selection and Reduction in Multivariate Calibration and Modelling
    Vander Heyden, Yvan
    Andries, Jan P. M.
    Goodarzi, Mohammad
    LC GC EUROPE, 2011, 24 (12) : 642 - 644
  • [5] Variable selection for neural networks in multivariate calibration
    Despagne, F
    Massart, DL
    CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 1998, 40 (02) : 145 - 163
  • [6] Using variable combination population analysis for variable selection in multivariate calibration
    Yun, Yong-Huan
    Wang, Wei-Ting
    Deng, Bai-Chuan
    Lai, Guang-Bi
    Liu, Xin-bo
    Ren, Da-Bing
    Liang, Yi-Zeng
    Fan, Wei
    Xu, Qing-Song
    ANALYTICA CHIMICA ACTA, 2015, 862 : 14 - 23
  • [7] Clustering and variable selection for categorical multivariate data
    Bontemps, Dominique
    Toussile, Wilson
    ELECTRONIC JOURNAL OF STATISTICS, 2013, 7 : 2344 - 2371
  • [8] Multivariate Calibration Transfer Employing Variable Selection and Subagging
    Martins, Marcelo N.
    Galvao, Roberto K. H.
    Pimentel, Maria Fernanda
    JOURNAL OF THE BRAZILIAN CHEMICAL SOCIETY, 2010, 21 (01) : 127 - U57
  • [9] Variable selection in multivariate calibration of a spectroscopic glucose sensor
    McShane, MJ
    Cote, GL
    Spiegelman, C
    APPLIED SPECTROSCOPY, 1997, 51 (10) : 1559 - 1564
  • [10] Multiobjective Firefly Algorithm for Variable Selection in Multivariate Calibration
    Martins de Paula, Lauro Cassio
    Soares, Anderson da Silva
    PROGRESS IN ARTIFICIAL INTELLIGENCE-BK, 2015, 9273 : 274 - 279