The biasing effect of compositional heterogeneity on phylogenetic estimates may be underestimated

被引:199
|
作者
Jermiin, LS [1 ]
Ho, SYW
Ababneh, F
Robinson, J
Larkum, AWD
机构
[1] Univ Sydney, Sch Biol Sci, Sydney, NSW 2006, Australia
[2] Univ Sydney, Sydney Univ Biol Informat & Technol Ctr, Sydney, NSW 2006, Australia
[3] Univ Sydney, Sch Math & Stat, Sydney, NSW 2006, Australia
基金
澳大利亚研究理事会;
关键词
sequence evolution; phylogenetics; phylogenetic assumptions; stationarity; compositional heterogeneity; compositional homogeneity; Monte Carlo simulation;
D O I
10.1080/10635150490468648
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
[No abstract available]
引用
收藏
页码:638 / 643
页数:6
相关论文
共 50 条
  • [1] Improvement of phylogenetic method to analyze compositional heterogeneity
    Zhang, Zehua
    Guo, Kecheng
    Pan, Gaofeng
    Tang, Jijun
    Guo, Fei
    BMC SYSTEMS BIOLOGY, 2017, 11
  • [2] Managerial heterogeneity and the compositional effect
    Hertel, TW
    Stiegert, KW
    APPLIED ECONOMICS LETTERS, 2000, 7 (04) : 271 - 274
  • [3] INCORPORATING COMPOSITIONAL HETEROGENEITY INTO LIE MARKOV MODELS FOR PHYLOGENETIC INFERENCE
    Hannaford, Naomi E.
    Heaps, Sarah E.
    Nye, Tom M. W.
    Williams, Tom A.
    Embley, T. Martin
    ANNALS OF APPLIED STATISTICS, 2020, 14 (04): : 1964 - 1983
  • [4] Compositional and mutational rate heterogeneity in mitochondrial genomes and its effect on the phylogenetic inferences of Cimicomorpha (Hemiptera: Heteroptera)
    Huanhuan Yang
    Teng Li
    Kai Dang
    Wenjun Bu
    BMC Genomics, 19
  • [5] Compositional and mutational rate heterogeneity in mitochondrial genomes and its effect on the phylogenetic inferences of Cimicomorpha (Hemiptera: Heteroptera)
    Yang, Huanhuan
    Li, Teng
    Dang, Kai
    Bu, Wenjun
    BMC GENOMICS, 2018, 19
  • [6] New Statistical Criteria Detect Phylogenetic Bias Caused by Compositional Heterogeneity
    Duchene, David A.
    Duchene, Sebastian
    Ho, Simon Y. W.
    MOLECULAR BIOLOGY AND EVOLUTION, 2017, 34 (06) : 1529 - 1534
  • [7] Heterogeneity in effect size estimates
    Holzmeister, Felix
    Johannesson, Magnus
    Boehm, Robert
    Dreber, Anna
    Huber, Juergen
    Kirchler, Michael
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2024, 121 (32)
  • [8] Effect of waterwashing on light ends compositional heterogeneity
    Lafargue, E
    LeThiez, P
    ORGANIC GEOCHEMISTRY, 1996, 24 (12) : 1141 - 1150
  • [9] Cervical screening - Effect of screening may be being underestimated
    Herbert, A
    BRITISH MEDICAL JOURNAL, 1997, 314 (7089): : 1277 - 1278
  • [10] COMPOSITIONAL HETEROGENEITY OF COPOLYMERS - EFFECT ON VISCOSITY AND FRACTIONATION STUDIES
    MACLEAN, DB
    MORTON, M
    NICHOLLS, RVV
    INDUSTRIAL AND ENGINEERING CHEMISTRY, 1949, 41 (08): : 1622 - 1625