Noninvasive characterization of Alzheimer's disease by circulating, cell-free messenger RNA next-generation sequencing

被引:41
|
作者
Toden, Shusuke [1 ]
Zhuang, Jiali [1 ]
Acosta, Alexander D. [1 ]
Karns, Amy P. [1 ]
Salathia, Neeraj S. [1 ,7 ]
Brewer, James B. [2 ]
Wilcock, Donna M. [3 ]
Aballi, Jonathan [1 ]
Nerenberg, Mike [1 ]
Quake, Stephen R. [4 ,5 ,6 ]
Ibarra, Arkaitz [1 ]
机构
[1] Mol Stethoscope Inc, 3210 Merryfield Row, San Diego, CA 92121 USA
[2] Univ Calif San Diego, Dept Neurosci, La Jolla, CA 92093 USA
[3] Sanders Brown Ctr Aging, Dept Physiol, 800 S Limestone St, Lexington, KY 40536 USA
[4] Stanford Univ, Dept Bioengn, Stanford, CA 94305 USA
[5] Stanford Univ, Dept Appl Phys, Stanford, CA 94305 USA
[6] Chan Zuckerberg Biohub, San Francisco, CA 94158 USA
[7] Bristol Myers Squibb, 9360 Towne Ctr Dr, San Diego, CA 92121 USA
关键词
AMYLOID HYPOTHESIS; DNA; DIAGNOSIS; PROGRESS;
D O I
10.1126/sciadv.abb1654
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The lack of accessible noninvasive tools to examine the molecular alterations occurring in the brain limits our understanding of the causes and progression of Alzheimer's disease (AD), as well as the identification of effective therapeutic strategies. Here, we conducted a comprehensive profiling of circulating, cell-free messenger RNA (cf-mRNA) in plasma of 126 patients with AD and 116 healthy controls of similar age. We identified 2591 dysregulated genes in the cf-mRNA of patients with AD, which are enriched in biological processes well known to be associated with AD. Dysregulated genes included brain-specific genes and resembled those identified to be dysregulated in postmortem AD brain tissue. Furthermore, we identified disease-relevant circulating gene transcripts that correlated with the severity of cognitive impairment. These data highlight the potential of high-throughput cf-mRNA sequencing to evaluate AD-related pathophysiological alterations in the brain, leading to precision healthcare solutions that could improve AD patient management.
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页数:9
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