Models of DNA Denaturation Dynamics: Universal Properties

被引:0
|
作者
Baiesi, M. [1 ,2 ]
Carlon, E. [3 ]
机构
[1] Univ Padua, Dipartimento Fis & Astron, I-35131 Padua, Italy
[2] Sez INFN Padova, I-35131 Padua, Italy
[3] Katholieke Univ Leuven, Inst Theoret Phys, B-3001 Louvain, Belgium
关键词
DNA denaturation; polymer dynamics; scaling laws; self-avoiding walks; TRANSITION;
D O I
暂无
中图分类号
O21 [概率论与数理统计]; C8 [统计学];
学科分类号
020208 ; 070103 ; 0714 ;
摘要
We briefly review some of the models used to describe DNA denaturation dynamics, focusing on the value of the dynamical exponent z, which governs the scaling of the characteristic time T similar to L-z as a function of the sequence length L. The models contain different degrees of simplifications, in particular sometimes they do not include a description for helical entanglement: we discuss how this aspect influences the value of z, which ranges from z = 0 to z approximate to 3.3. Connections with experiments are also mentioned.
引用
收藏
页码:569 / 576
页数:8
相关论文
共 50 条
  • [1] The dynamics of the DNA denaturation transition
    van Erp, Titus S.
    Peyrard, Michel
    EPL, 2012, 98 (04)
  • [2] Loop dynamics in DNA denaturation
    Bar, A.
    Kafri, Y.
    Mukamel, D.
    PHYSICAL REVIEW LETTERS, 2007, 98 (03)
  • [3] A model for simulating dynamics of DNA denaturation
    Drukker, K
    Schatz, GC
    JOURNAL OF PHYSICAL CHEMISTRY B, 2000, 104 (26): : 6108 - 6111
  • [4] Stochastic dynamics and denaturation of thermalized DNA
    Deng, Mao Lin
    Zhu, Wei Qiu
    PHYSICAL REVIEW E, 2008, 77 (02):
  • [5] Simulation studies of DNA denaturation dynamics
    Al Qanobi, Amal J.
    Al Lawatia, Issam A.
    EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 2021, 50 (SUPPL 1): : 190 - 190
  • [6] Single DNA denaturation and bubble dynamics
    Metzler, Ralf
    Ambjoernsson, Tobias
    Hanke, Andreas
    Fogedby, Hans C.
    JOURNAL OF PHYSICS-CONDENSED MATTER, 2009, 21 (03)
  • [7] Modes simulations of DNA denaturation dynamics
    Drukker, K
    Wu, GS
    Schatz, GC
    JOURNAL OF CHEMICAL PHYSICS, 2001, 114 (01): : 579 - 590
  • [8] Improving the mesoscopic modeling of DNA denaturation dynamics
    Marty-Roda, Marta
    Dahlen, Oda
    van Erp, Titus S.
    Cuesta-Lopez, Santiago
    PHYSICAL BIOLOGY, 2018, 15 (06)
  • [9] DYNAMICS AND THERMODYNAMICS OF A NONLINEAR MODEL FOR DNA DENATURATION
    DAUXOIS, T
    PEYRARD, M
    BISHOP, AR
    PHYSICAL REVIEW E, 1993, 47 (01): : 684 - 695
  • [10] Model for simulating dynamics of DNA denaturation.
    Schatz, GC
    Drukker, K
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2000, 220 : U176 - U177