Whole-transcriptome paired-end sequencing and the pancreatic cancer genetic landscape

被引:0
|
作者
Macchini, Marina
Astolfi, Annalisa
Indio, Valentina
Vecchiarelli, Silvia
Grassi, Elisa
Serra, Carla
Casadei, Riccardo
Santini, Donatella
D'Ambra, Marielda
Ricci, Claudio
Minni, Francesco
Biasco, Guido
Di Marco, Mariacristina
机构
[1] St Orsola Marcello Malpighi Hosp, Dept Oncol, Bologna, Italy
[2] Interdept Ctr Canc Res, Bologna, Italy
[3] Univ Bologna, Dept Biol, Biocomp Grp, CIRI Hlth Sci & Technol, I-40126 Bologna, Italy
[4] Univ Bologna, Bologna, Italy
[5] Univ Bologna, Dept Surg, Bologna, Italy
[6] St Orsola Marcello Malpighi Hosp, Pathol Unit, Bologna, Italy
[7] Dept Surg, Bologna, Italy
[8] Dept Oncol, Bologna, Italy
关键词
D O I
暂无
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
4048
引用
收藏
页数:1
相关论文
共 50 条
  • [1] Chimeric transcript discovery by paired-end transcriptome sequencing
    Maher, Christopher A.
    Palanisamy, Nallasivam
    Brenner, John C.
    Cao, Xuhong
    Kalyana-Sundaram, Shanker
    Luo, Shujun
    Khrebtukova, Irina
    Barrette, Terrence R.
    Grasso, Catherine
    Yu, Jindan
    Lonigro, Robert J.
    Schroth, Gary
    Kumar-Sinha, Chandan
    Chinnaiyan, Arul M.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (30) : 12353 - 12358
  • [2] The Drosophila melanogaster transcriptome by paired-end RNA sequencing
    Daines, Bryce
    Wang, Hui
    Wang, Liguo
    Li, Yumei
    Han, Yi
    Emmert, David
    Gelbart, William
    Wang, Xia
    Li, Wei
    Gibbs, Richard
    Chen, Rui
    GENOME RESEARCH, 2011, 21 (02) : 315 - 324
  • [3] A paired-end sequencing strategy to map the complex landscape of transcription initiation
    Ni T.
    Corcoran D.L.
    Rach E.A.
    Song S.
    Spana E.P.
    Gao Y.
    Ohler U.
    Zhu J.
    Nature Methods, 2010, 7 (7) : 521 - 527
  • [4] A paired-end sequencing strategy to map the complex landscape of transcription initiation
    Ni, Ting
    Corcoran, David L.
    Rach, Elizabeth A.
    Song, Shen
    Spana, Eric P.
    Gao, Yuan
    Ohler, Uwe
    Zhu, Jun
    NATURE METHODS, 2010, 7 (07) : 521 - U57
  • [5] BreakFusion: targeted assembly-based identification of gene fusions in whole transcriptome paired-end sequencing data
    Chen, Ken
    Wallis, John W.
    Kandoth, Cyriac
    Kalicki-Veizer, Joelle M.
    Mungall, Karen L.
    Mungall, Andrew J.
    Jones, Steven J.
    Marra, Marco A.
    Ley, Timothy J.
    Mardis, Elaine R.
    Wilson, Richard K.
    Weinstein, John N.
    Ding, Li
    BIOINFORMATICS, 2012, 28 (14) : 1923 - 1924
  • [6] Transcriptome Analysis of Silver Carp (Hypophthalmichthys molitrix) by Paired-End RNA Sequencing
    Fu, Beide
    He, Shunping
    DNA RESEARCH, 2012, 19 (02) : 131 - 142
  • [7] De novo assembly and characterization of Camelina sativa transcriptome by paired-end sequencing
    Liang, Chao
    Liu, Xuan
    Yiu, Siu-Ming
    Lim, Boon Leong
    BMC GENOMICS, 2013, 14
  • [8] Reconstructing cancer genomes from paired-end sequencing data
    Oesper, Layla
    Ritz, Anna
    Aerni, Sarah J.
    Drebin, Ryan
    Raphael, Benjamin J.
    BMC BIOINFORMATICS, 2012, 13
  • [9] Mapping fusion genes in breast cancer by paired-end sequencing
    Howarth, K.
    Schulte, I.
    Batty, E. M.
    Pole, J. C. M.
    Weaver, J. M. J.
    Cooke, S. L.
    Ng, C.
    Howe, K.
    Chin, S. F.
    Brenton, J.
    Caldas, C.
    Edwards, P. A. W.
    CELLULAR ONCOLOGY, 2012, 35 : S44 - S45
  • [10] Reconstructing cancer genomes from paired-end sequencing data
    Layla Oesper
    Anna Ritz
    Sarah J Aerni
    Ryan Drebin
    Benjamin J Raphael
    BMC Bioinformatics, 13