Constructing a genetic linkage map and mapping quantitative trait loci for skeletal traits in Japanese flounder

被引：6
|
作者：
Liu, Yi [1 ,2 ]
Liu, Yongxin [3 ]
Liu, Yingjie [3 ]
Zhang, Xiaoyan [1 ]
Si, Fei [1 ]
Sun, Zhaohui [1 ]
Wang, Guixing [1 ]
Wang, Yufen [1 ]
Yang, Runqing [4 ]
Liu, Haijin [4 ]
机构：
[1] Chinese Acad Fishery Sci, Beidaihe Cent Expt Stn, Qinhuangdao 066100, Peoples R China
[2] Chinese Acad Fishery Sci, Pearl River Fisheries Res Inst, Minist Agr, Key Lab Trop & Subtrop Fishery Resource Applicat, Guangzhou 510380, Guangdong, Peoples R China
[3] Chinese Acad Fishery Sci, Res Ctr Biotechnol, Beijing 100141, Peoples R China
[4] Chinese Acad Fishery Sci, Res Ctr Fisheries Recourse & Environm, Beijing 100141, Peoples R China
来源：
BIOLOGIA | 2013年 / 68卷 / 06期
关键词：
doubled haploid; linkage map; type II SSR; EST-SSR; Japanese flounder; skeletal traits; PARALICHTHYS-OLIVACEUS; SEQUENCES; PLANTS; CROSS; QTLS; DNA; L;
D O I：
10.2478/s11756-013-0265-4
中图分类号：
Q [生物科学];
学科分类号：
07 ; 0710 ; 09 ;
摘要：
A genetic linkage map of Japanese flounder was constructed using 165 doubled haploids (DHs) derived from a single female. A total of 574 genomic microsatellites (type II SSRs) and expressed sequence tag (EST)-derived markers (EST-SSRs) were mapped to 24 linkage groups. The length of linkage map was estimated as 1270.9 centiMorgans (cM), with an average distance between markers of 2.2 cM. The EST-SSRs were used together with type II SSR markers to construct the Japanese flounder genetic linkage map which will facilitate identify quantitative trait locus (QTL) controlling important economic traits in Japanese flounder. Thus, twelve skeletal traits at 2 years of age were measured for all DHs. Forty-one QTLs were detected on 14 linkage groups and totally account for a small proportion of phenotypic variation (4.5 to 17.3%). Most of QTLs detected distribute on linkage groups 5 (9 QTLs), 8 (9 QTLs), 9 (5 QTLs) and 20 (4 QTLs), in which, some QTLs perform the pleiotropy.
引用
收藏
页码：1221 / 1228
页数：8
相关论文
共 50 条
  • [1] Constructing a genetic linkage map and mapping quantitative trait loci for skeletal traits in Japanese flounder
    Yi Liu
    Yongxin Liu
    Yingjie Liu
    Xiaoyan Zhang
    Fei Si
    Zhaohui Sun
    Guixing Wang
    Yufen Wang
    Runqing Yang
    Haijin Liu
    Biologia, 2013, 68 : 1221 - 1228
  • [2] Genetic linkage map construction and quantitative trait loci mapping of agronomic traits in Gloeostereum incarnatum
    Jiang, Wan-Zhu
    Yao, Fang-Jie
    Lu, Li-Xin
    Fang, Ming
    Wang, Peng
    Zhang, You-Min
    Meng, Jing-Jing
    Lu, Jia
    Ma, Xiao-Xu
    He, Qi
    Shao, Kai-Sheng
    JOURNAL OF MICROBIOLOGY, 2021, 59 (01) : 41 - 50
  • [3] Genetic linkage map construction and quantitative trait loci mapping of agronomic traits in Gloeostereum incarnatum
    Wan-Zhu Jiang
    Fang-Jie Yao
    Li-Xin Lu
    Ming Fang
    Peng Wang
    You-Min Zhang
    Jing-Jing Meng
    Jia Lu
    Xiao-Xu Ma
    Qi He
    Kai-Sheng Shao
    Journal of Microbiology, 2021, 59 : 41 - 50
  • [4] Constructing a new integrated genetic linkage map and mapping quantitative trait loci for vegetative mycelium growth rate in Lentinula edodes
    Gong, Wen-Bing
    Liu, Wei
    Lu, Ying-Ying
    Bian, Yin-Bing
    Zhou, Yan
    Kwan, Hoi Shan
    Cheung, Man Kit
    Xiao, Yang
    FUNGAL BIOLOGY, 2014, 118 (03) : 295 - 308
  • [5] Genetic linkage mapping of quantitative trait loci for behavioral and neuroendocrine stress response traits in pigs
    Désautés, C
    Bidanel, JP
    Milan, D
    Iannuccelli, N
    Amigues, Y
    Bourgeois, F
    Caritez, JC
    Renard, C
    Chevalet, C
    Mormède, P
    JOURNAL OF ANIMAL SCIENCE, 2002, 80 (09) : 2276 - 2285
  • [6] A Molecular Genetic Linkage Map of Eucommia ulmoides and Quantitative Trait Loci ( QTL) Analysis for Growth Traits
    Li, Yu
    Wang, Dawei
    Li, Zhouqi
    Wei, Junkun
    Jin, Cangfu
    Liu, Minhao
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2014, 15 (02) : 2053 - 2074
  • [7] Genetic mapping of quantitative trait loci for traits with ordinal distributions
    Hackett, CA
    Weller, JI
    BIOMETRICS, 1995, 51 (04) : 1252 - 1263
  • [8] Construction of a genetic linkage map and analysis of quantitative trait loci associated with the agronomically important traits of Pleurotus eryngii
    Im, Chak Han
    Park, Young-Hoon
    Hammel, Kenneth E.
    Park, Bokyung
    Kwon, Soon Wook
    Ryu, Hojin
    Ryu, Jae-San
    FUNGAL GENETICS AND BIOLOGY, 2016, 92 : 50 - 64
  • [9] Construction of a dense genetic linkage map and mapping quantitative trait loci for economic traits of a doubled haploid population of Pyropia haitanensis (Bangiales, Rhodophyta)
    Xu, Yan
    Huang, Long
    Ji, Dehua
    Chen, Changsheng
    Zheng, Hongkun
    Xie, Chaotian
    BMC PLANT BIOLOGY, 2015, 15
  • [10] Construction of a dense genetic linkage map and mapping quantitative trait loci for economic traits of a doubled haploid population of Pyropia haitanensis (Bangiales, Rhodophyta)
    Yan Xu
    Long Huang
    Dehua Ji
    Changsheng Chen
    Hongkun Zheng
    Chaotian Xie
    BMC Plant Biology, 15
12345