Characterization of the complete chloroplast genome of Glycyrrhiza uralensis (Leguminosae), a traditional Chinese medicine

被引:4
|
作者
Jia, Guolun [1 ,2 ]
Li, Peng [3 ]
Zhu, Qiang [2 ]
Peng, Li [4 ]
机构
[1] Northwest Univ, Xian, Shaanxi, Peoples R China
[2] Ningxia Forestry Int, State Key Lab Seeding Bioengn, Yinchuan 750004, Ningxia, Peoples R China
[3] Xian Int Univ, Xian, Shaanxi, Peoples R China
[4] Ningxia Univ, Sch Life Sci, Minist Educ Protect & Utilizat Special Biol Resou, Key Lab, Yinchuan, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
基金
中国国家自然科学基金;
关键词
Glycyrrhiza uralensis; Leguminosae; chloroplast genome; Illumina sequencing; phylogenetic analysis; PLANT;
D O I
10.1080/23802359.2019.1666050
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Glycyrrhiza uralensis is a tradational Chinese medicine of Leguminosae, which contains many chemicals, such as glycyrrhizin, liquiritin glycyrol, melatonin (N-acetyl-5-methoxy tryptamine), glycyrrhizol A, glycyrrhizol B and four known isoflavonoids (5-O-methylglycryol, isoglycyrol, 6,8-diisoprenyl-5,7,4 '-trihydroxy isoflavone, gancaonin). Illumina paired-end reads data was used to assemble the complete chloroplast (cp) genome. About 15,445,866 raw Paired-End Reads and the length distribution in 127,702 bp (GC content accounts for 34.3%). Eight PCG genes and six tRNA genes possess a single intron, while ycf3 has a couple of introns. Based on the concatenated coding sequences of cp PCGs, the phylogenetic analysis showed that Glycyrrhiza uralensis and Glycyrrhiza inflata (MH321931) are closely related to each other within the family Leguminosae.
引用
收藏
页码:3040 / 3041
页数:2
相关论文
共 50 条
  • [1] The complete mitochondrial genome of Glycyrrhiza uralensis Fisch. (Fabales, Leguminosae)
    Yang, Yan-Yun
    Li, Sheng-Nan
    Xu, Liang
    Xing, Yan-Ping
    Zhao, Rong
    Bao, Gui-Hua
    Zhang, Ting-Ting
    Zhang, Da-Chuan
    Song, Yue-Yue
    Ao, Wu-Liji
    Kang, Ting-Guo
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (02): : 475 - 477
  • [2] Characterization of the complete chloroplast genome of Euphorbia lathyris (Euphorbiaceae), a traditional Chinese medicine
    Zhao, Xueyan
    Wang, Qing
    Wang, Fangyuan
    Li, Yan
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2129 - 2130
  • [3] Characterization of the complete chloroplast genome of Ephedra sinica Stapf (Ephedraceae), a traditional Chinese medicine
    Li, Peng
    Zhang, Jinyang
    Liang, Xiaoqing
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3301 - 3302
  • [4] The complete chloroplast genome of Glycyrrhiza uralensis Fisch. isolated in Korea (Fabaceae)
    Kim, Mi-Hee
    Park, Suhyeon
    Lee, Junho
    Baek, Jinwook
    Park, Jongsun
    Lee, Gun Woong
    KOREAN JOURNAL OF PLANT TAXONOMY, 2021, 51 (04): : 353 - 362
  • [5] Characterization of the complete chloroplast genome of Euphorbia helioscopia Linn. (Euphorbiaceae), a traditional Chinese medicine
    Li, Peng
    Liang, Xiaoqing
    Zhang, Xiaoni
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3770 - 3771
  • [6] Characterization and phylogenetic analysis of the complete chloroplast genome of Ilex rotunda, traditional Chinese medicine plant
    Chen, Hong
    Chong, Xinran
    Zhou, Yanwei
    Sun, Linhe
    Zhang, Fan
    Lu, Xiaoqing
    Li, Naiwei
    Zhou, Ting
    Li, Yunlong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (10): : 2791 - 2792
  • [7] Characterization of the complete chloroplast genome of Ammopiptanthus mongolicus (Leguminosae)
    Jing Hu
    Yan Peiying
    Li Chang
    Zhang, Huiwen
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (11): : 3162 - 3163
  • [8] Characterization of the complete chloroplast genome of Dalbergia cultrata (Leguminosae)
    Liu, Yu
    Huang, Ping
    Li, Chang-Hong
    Zang, Feng-Qi
    Zheng, Yong-Qi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2369 - 2370
  • [9] The complete chloroplast genome sequence of a traditional Chinese medicine: Achyranthes bidentata (Amaranthaceae)
    Li, Zheng-Hui
    Li, Xiao-Hua
    Ling, Li-Zhen
    Ai, Hong-Lian
    Zhang, Shu-Dong
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 158 - 159
  • [10] The complete chloroplast genome sequence of traditional Chinese medicine Uncaria macrophylla (Rubiaceae)
    Zhang, Miao
    Chen, Min-Min
    Zhang, Xue-Min
    Chen, Shao-Ning
    Liang, Zong-Suo
    MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (04): : 694 - 695