Structure of outer membrane protein G by solution NMR spectroscopy

被引:117
|
作者
Liang, Binyong [1 ]
Tamm, Lukas K. [1 ]
机构
[1] Univ Virginia, Dept Mol Physiol & Biol Phys, Charlottesville, VA 22908 USA
关键词
porin; membrane protein folding; dodecylphosphocholine micelle;
D O I
10.1073/pnas.0705466104
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The bacterial outer membrane protein G (OmpG), a monomeric pH-gated porin, was overexpressed in Escherichia coli and refolded in beta-octyl glucoside micelles. After transfer into dodecylphosphocholine micelles, the solution structure of OmpG was determined by solution NMR spectroscopy at pH 6.3. Complete backbone assignments were obtained for 234 of 280 residues based on CA, CB, and CO connection pathways determined from a series of TROSY-based 3D experiments at 800 MHz. The global fold of the 14-stranded beta-barrel was determined based on 133 long-range NOEs observed between neighboring strands and local chemical shift and NOE information. The structure of the barrel is very similar to previous crystal structures, but the loops of the solution structure are quite flexible.
引用
收藏
页码:16140 / 16145
页数:6
相关论文
共 50 条
  • [1] Structure of outer membrane protein A transmembrane domain by NMR spectroscopy
    Arora, A
    Abildgaard, F
    Bushweller, JH
    Tamm, LK
    NATURE STRUCTURAL BIOLOGY, 2001, 8 (04) : 334 - 338
  • [2] Structure of outer membrane protein A transmembrane domain by NMR spectroscopy
    Ashish Arora
    Frits Abildgaard
    John H. Bushweller
    Lukas K. Tamm
    Nature Structural Biology, 2001, 8 : 334 - 338
  • [3] NMR solution structure and dynamics of the outer membrane protein A transmembrane domain in dodecylphosphocholine micelles
    Arora, A
    Abildgaard, F
    Bushweller, JH
    Tamm, LK
    BIOPHYSICAL JOURNAL, 2002, 82 (01) : 516A - 516A
  • [4] Solution structure and dynamics of the outer membrane enzyme PagP by NMR
    Hwang, PM
    Choy, WY
    Lo, EI
    Chen, L
    Forman-Kay, JD
    Raetz, CRH
    Privé, GG
    Bishop, RE
    Kay, LE
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (21) : 13560 - 13565
  • [5] Membrane protein structure and topology by NMR spectroscopy
    Marassi, FM
    Almeida, FCL
    Ramamoorthy, A
    Kim, Y
    Zasloff, M
    Schendel, SL
    Cramer, WA
    Opella, SJ
    BIOPHYSICAL JOURNAL, 1996, 70 (02) : SU397 - SU397
  • [6] Structure of outer membrane protein G in lipid bilayers
    Retel, Joren S.
    Nieuwkoop, Andrew J.
    Hiller, Matthias
    Higman, Victoria A.
    Barbet-Massin, Emeline
    Stanek, Jan
    Andreas, Loren B.
    Franks, W. Trent
    van Rossum, Barth-Jan
    Vinothkumar, Kutti R.
    Handel, Lieselotte
    de Palma, Gregorio Giuseppe
    Bardiaux, Benjamin
    Pintacuda, Guido
    Emsley, Lyndon
    Kuehlbrandt, Werner
    Oschkinat, Hartmut
    NATURE COMMUNICATIONS, 2017, 8
  • [7] Structure of outer membrane protein G in lipid bilayers
    Joren S. Retel
    Andrew J. Nieuwkoop
    Matthias Hiller
    Victoria A. Higman
    Emeline Barbet-Massin
    Jan Stanek
    Loren B. Andreas
    W. Trent Franks
    Barth-Jan van Rossum
    Kutti R. Vinothkumar
    Lieselotte Handel
    Gregorio Giuseppe de Palma
    Benjamin Bardiaux
    Guido Pintacuda
    Lyndon Emsley
    Werner Kühlbrandt
    Hartmut Oschkinat
    Nature Communications, 8
  • [8] Membrane Protein Structure and Dynamics from NMR Spectroscopy
    Hong, Mei
    Zhang, Yuan
    Hu, Fanghao
    ANNUAL REVIEW OF PHYSICAL CHEMISTRY, VOL 63, 2012, 63 : 1 - 24
  • [9] Solution NMR Spectroscopy and Protein Interaction Studies of Membrane Proteins in Nanodiscs
    Glueck, Julian M.
    Wittlich, Marc
    Feuerstein, Sophie
    Willbold, Dieter
    Koenig, Bernd W.
    BIOPHYSICAL JOURNAL, 2011, 100 (03) : 551 - 552
  • [10] PROTEIN-STRUCTURE DETERMINATION IN SOLUTION BY NMR-SPECTROSCOPY
    WUTHRICH, K
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1990, 265 (36) : 22059 - 22062