Regularized regression on compositional trees with application to MRI analysis

被引:1
|
作者
Wang, Bingkai [1 ]
Caffo, Brian S. [1 ]
Luo, Xi [2 ]
Liu, Chin-Fu [3 ]
Faria, Andreia, V [4 ]
Miller, Michael, I [3 ]
Zhao, Yi [5 ,6 ]
机构
[1] Johns Hopkins Bloomberg Sch Publ Hlth, Dept Biostat, Baltimore, MD USA
[2] Univ Texas Hlth Sci Ctr Houston, Dept Biostat & Data Sci, Houston, TX 77030 USA
[3] Johns Hopkins Univ, Ctr Imaging Sci, Biomed Engn, Baltimore, MD 21205 USA
[4] Johns Hopkins Univ, Sch Med, Dept Radiol, Baltimore, MD 21205 USA
[5] Indiana Univ Sch Med, Dept Biostat, Indianapolis, IN 46202 USA
[6] Alzheimers Dis Neuroimaging Initiat, Indiana, PA USA
关键词
composition; hierarchical tree; regularized regression; ALZHEIMERS-DISEASE; SELECTION; SPARSITY; ATROPHY;
D O I
10.1111/rssc.12545
中图分类号
O21 [概率论与数理统计]; C8 [统计学];
学科分类号
020208 ; 070103 ; 0714 ;
摘要
A compositional tree refers to a tree structure on a set of random variables where each random variable is a node and composition occurs at each non-leaf node of the tree. As a generalization of compositional data, compositional trees handle more complex relationships among random variables and appear in many disciplines, such as brain imaging, genomics and finance. We consider the problem of sparse regression on data that are associated with a compositional tree and propose a transformation-free tree-based regularized regression method for component selection. The regularization penalty is designed based on the tree structure and encourages a sparse tree representation. We prove that our proposed estimator for regression coefficients is both consistent and model selection consistent. In the simulation study, our method shows higher accuracy than competing methods under different scenarios. By analysing a brain imaging data set from studies of Alzheimer's disease, our method identifies meaningful associations between memory decline and volume of brain regions that are consistent with current understanding.
引用
收藏
页码:541 / 561
页数:21
相关论文
共 50 条
  • [1] Interpretation of Compositional Regression with Application to Time Budget Analysis
    Muller, Ivo
    Hron, Karel
    Fiserova, Eva
    Smahaj, Jan
    Cakirpaloglu, Panajotis
    Vancakova, Jana
    AUSTRIAN JOURNAL OF STATISTICS, 2018, 47 (02) : 3 - 19
  • [2] Application of Regression Trees
    Sedlacik, Marek
    XXIX INTERNATIONAL COLLOQUIUM ON THE MANAGEMENT OF EDUCATIONAL PROCESS, PT 1, 2011, : 275 - 280
  • [3] Robust Regression with Compositional Response: Application to Geosciences
    Hron, Karel
    Filzmoser, Peter
    Templ, Matthias
    van den Boogaart, Karl Gerald
    Tolosana-Delgado, Raimon
    MATHEMATICS OF PLANET EARTH, 2014, : 87 - 90
  • [4] REGRESSION ANALYSIS FOR MICROBIOME COMPOSITIONAL DATA
    Shi, Pixu
    Zhang, Anru
    Li, Hongzhe
    ANNALS OF APPLIED STATISTICS, 2016, 10 (02): : 1019 - 1040
  • [5] A Regularized Multivariate Regression Approach for eQTL Analysis
    Wang X.
    Qin L.
    Zhang H.
    Zhang Y.
    Hsu L.
    Wang P.
    Statistics in Biosciences, 2015, 7 (1) : 129 - 146
  • [6] Regularized Discriminant Analysis, Ridge Regression and Beyond
    Zhang, Zhihua
    Dai, Guang
    Xu, Congfu
    Jordan, Michael I.
    JOURNAL OF MACHINE LEARNING RESEARCH, 2010, 11 : 2199 - 2228
  • [7] Regression among parts of compositional data with an economic application
    Hruzova, Klara
    Hron, Karel
    Filzmoser, Peter
    Todorov, Valentin
    MATHEMATICAL METHODS IN ECONOMICS (MME 2014), 2014, : 337 - 342
  • [8] Bayesian group selection in logistic regression with application to MRI data analysis
    Lee, Kyoungjae
    Cao Xuan
    BIOMETRICS, 2021, 77 (02) : 391 - 400
  • [9] Multiple additive regression trees with application in epidemiology
    Friedman, JH
    Meulman, JJ
    STATISTICS IN MEDICINE, 2003, 22 (09) : 1365 - 1381
  • [10] Parallel block coordinate minimization with application to group regularized regression
    Calafiore, Giuseppe C.
    OPTIMIZATION AND ENGINEERING, 2016, 17 (04) : 941 - 964