A novel image signature-based radiomics method to achieve precise diagnosis and prognostic stratification of gliomas

被引:19
|
作者
Luo, Huigao [1 ]
Zhuang, Qiyuan [2 ]
Wang, Yuanyuan [1 ]
Abudumijiti, Aibaidula [2 ]
Shi, Kuangyu [3 ,4 ]
Rominger, Axel [3 ]
Chen, Hong [2 ]
Yang, Zhong [2 ]
Tran, Vanessa [5 ]
Wu, Guoqing [1 ]
Li, Zeju [1 ,6 ]
Fan, Zhen [2 ]
Qi, Zengxin [2 ]
Guo, Yuxiao [2 ]
Yu, Jinhua [1 ,7 ,8 ]
Shi, Zhifeng [2 ]
机构
[1] Fudan Univ, Dept Elect Engn, Shanghai, Peoples R China
[2] Fudan Univ, Huashan Hosp, Dept Neurosurg, Shanghai, Peoples R China
[3] Univ Bern, Dept Nucl Med, Bern, Switzerland
[4] Tech Univ Munich, Dept Informat, Munich, Germany
[5] Univ Melbourne, B BMed, Melbourne, Vic, Australia
[6] Imperial Coll, Dept Comp, London, England
[7] Fudan Univ, Huashan Hosp, Dept Neurosurg, AI Lab, Shanghai 200433, Peoples R China
[8] Key Lab Med Imaging Comp & Comp Assisted Interven, Shanghai, Peoples R China
基金
中国国家自然科学基金;
关键词
CLASSIFICATION; MUTATION; IDH1; TUMORS; TERT; EGFR;
D O I
10.1038/s41374-020-0472-x
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Radiomics has potential advantages in the noninvasive histopathological and molecular diagnosis of gliomas. We aimed to develop a novel image signature (IS)-based radiomics model to achieve multilayered preoperative diagnosis and prognostic stratification of gliomas. Herein, we established three separate case cohorts, consisting of 655 glioma patients, and carried out a retrospective study. Image and clinical data of three cohorts were used for training (N = 188), cross-validation (N = 411), and independent testing (N = 56) of the IS model. All tumors were segmented from magnetic resonance (MR) images by the 3D U-net, followed by extraction of high-throughput network features, which were referred to as IS. IS was then used to perform noninvasive histopathological diagnosis and molecular subtyping. Moreover, a new IS-based clustering method was applied for prognostic stratification in IDH-wild-type lower-grade glioma (IDHwt LGG) and triple-negative glioblastoma (1p19q retain/IDH wild-type/TERTp-wild-type GBM). The average accuracies of histological diagnosis and molecular subtyping were 89.8 and 86.1% in the cross-validation cohort, while these numbers reached 83.9 and 80.4% in the independent testing cohort. IS-based clustering method was demonstrated to successfully divide IDHwt LGG into two subgroups with distinct median overall survival time (48.63 vs 38.27 months respectively,P = 0.023), and two subgroups in triple-negative GBM with different median OS time (36.8 vs 18.2 months respectively,P = 0.013). Our findings demonstrate that our novel IS-based radiomics model is an effective tool to achieve noninvasive histo-molecular pathological diagnosis and prognostic stratification of gliomas. This IS model shows potential for future routine use in clinical practice. In this paper, the authors describe the development and validation of a novel image signature-based radiomics model. A total of 655 glioma patients were enrolled to build this model which is shown to be an effective tool to achieve multilayer preoperative diagnosis and prognostic stratification of gliomas.
引用
收藏
页码:450 / 462
页数:13
相关论文
共 40 条
  • [1] Deep Learning-Based Radiomics for Prognostic Stratification of Low-Grade Gliomas Using a Multiple-Gene Signature
    Karabacak, Mert
    Ozkara, Burak B.
    Senparlak, Kaan
    Bisdas, Sotirios
    APPLIED SCIENCES-BASEL, 2023, 13 (06):
  • [2] A signature-based bag of visual words method for image indexing and search
    dos Santos, Joyce Miranda
    de Moura, Edleno Silva
    da Silva, Altigran Soares
    Cavalcanti, Joao Marcos B.
    Torres, Ricardo da Silva
    Vidal, Marcio Luiz A.
    PATTERN RECOGNITION LETTERS, 2015, 65 : 1 - 7
  • [3] Development and Validation of a Novel Metabolic Signature-Based Prognostic Model for Uveal Melanoma
    Shi, Ke
    Li, Xinxin
    Zhang, Jingfa
    Sun, Xiaodong
    TRANSLATIONAL VISION SCIENCE & TECHNOLOGY, 2022, 11 (05):
  • [4] Cost-Effectiveness Analysis of Prognostic Gene Expression Signature-Based Stratification of Early Breast Cancer Patients
    Patricia R. Blank
    Martin Filipits
    Peter Dubsky
    Florian Gutzwiller
    Michael P. Lux
    Jan C. Brase
    Karsten E. Weber
    Margaretha Rudas
    Richard Greil
    Sibylle Loibl
    Thomas D. Szucs
    Ralf Kronenwett
    Matthias Schwenkglenks
    Michael Gnant
    PharmacoEconomics, 2015, 33 : 179 - 190
  • [5] Cost-Effectiveness Analysis of Prognostic Gene Expression Signature-Based Stratification of Early Breast Cancer Patients
    Blank, Patricia R.
    Filipits, Martin
    Dubsky, Peter
    Gutzwiller, Florian
    Lux, Michael P.
    Brase, Jan C.
    Weber, Karsten E.
    Rudas, Margaretha
    Greil, Richard
    Loibl, Sibylle
    Szucs, Thomas D.
    Kronenwett, Ralf
    Schwenkglenks, Matthias
    Gnant, Michael
    PHARMACOECONOMICS, 2015, 33 (02) : 179 - 190
  • [6] Color and texture applied to a signature-based bag of visual words method for image retrieval
    Joyce Miranda dos Santos
    Edleno Silva de Moura
    Altigran Soares da Silva
    Ricardo da Silva Torres
    Multimedia Tools and Applications, 2017, 76 : 16855 - 16872
  • [7] Color and texture applied to a signature-based bag of visual words method for image retrieval
    dos Santos, Joyce Miranda
    de Moura, Edleno Silva
    da Silva, Altigran Soares
    Torres, Ricardo da Silva
    MULTIMEDIA TOOLS AND APPLICATIONS, 2017, 76 (15) : 16855 - 16872
  • [8] A novel mutational signature-based tumor genomic subtyping method predicts response to immune checkpoint inhibitors
    Takamatsu, Shiro
    Matsumura, Noriomi
    Yamanoi, Koji
    Yamaguchi, Ken
    Hamanishi, Junzo
    Mandai, Masaki
    CANCER SCIENCE, 2022, 113 : 709 - 709
  • [9] Diagnosis of Ovarian Neoplasms Using Nomogram in Combination With Ultrasound Image-Based Radiomics Signature and Clinical Factors
    Qi, Lisha
    Chen, Dandan
    Li, Chunxiang
    Li, Jinghan
    Wang, Jingyi
    Zhang, Chao
    Li, Xiaofeng
    Qiao, Ge
    Wu, Haixiao
    Zhang, Xiaofang
    Ma, Wenjuan
    FRONTIERS IN GENETICS, 2021, 12
  • [10] A novel SAR image precise-matching method based on SIFT algorithm
    Yan, Wenwen
    Li, Bin
    Yang, Dekun
    Tian, Jinwen
    Yu, Qiong
    MIPPR 2013: REMOTE SENSING IMAGE PROCESSING, GEOGRAPHIC INFORMATION SYSTEMS, AND OTHER APPLICATIONS, 2013, 8921