QSAR modelling of organic dyes for their acute toxicity in Daphnia magna using 2D-descriptors

被引:11
|
作者
Jillella, G. K. [1 ]
Roy, K. [2 ]
机构
[1] Natl Inst Pharmaceut Educ & Res NIPER, Dept Pharmacoinformat, Kolkata, India
[2] Jadavpur Univ, Dept Pharmaceut Technol, Drug Theoret & Cheminformat Lab, Kolkata, India
关键词
QSAR; OECD; LDA; Daphnia magna; toxicity; organic dyes; LEAST-SQUARES REGRESSION; REMOVAL; TEXTILE; WATER; PREDICTION; HYDROCARBONS; EFFLUENT; COLOR; RED;
D O I
10.1080/1062936X.2022.2033318
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The present study reports quantitative structure-activity relationship (QSAR) models for 22 organic dyes spanning a broad chemical domain to predict their toxicity in Daphnia magna [log (1/EC50)]. Only two-dimensional descriptors with clear physicochemical meaning were used to construct the QSAR models. The process of development, validation, and interpretation of models adheres to the stringent recommendations of the Organization for Economic Cooperation and Development (OECD) guidelines. In this study, the multi-layered stepwise regression method and linear discriminant analysis (LDA) method were employed for the deployment of regression - and classification-based models respectively; however, the final regression-based QSAR models were obtained through the partial least squares (PLS) regression. Additionally, the applicability domain of the developed models was verified. The constructed models should be applicable in the absence of toxicity data of new or untested dye structures, particularly when the compounds fall within the developed models' scope, and also implementable to develop more environmentally friendly alternatives.
引用
收藏
页码:111 / 139
页数:29
相关论文
共 50 条
  • [1] QSAR Modelling of the Toxicity of Diverse Organic Chemicals to Daphnia magna by Using 2-D and 3-D Descriptors
    Kar, S.
    Roy, K.
    ATLA-ALTERNATIVES TO LABORATORY ANIMALS, 2011, 39 (01): : 74 - 75
  • [2] QSAR modeling of toxicity of diverse organic chemicals to Daphnia magna using 2D and 3D descriptors
    Kar, Supratik
    Roy, Kunal
    JOURNAL OF HAZARDOUS MATERIALS, 2010, 177 (1-3) : 344 - 351
  • [3] QSAR Classification Models of Acute Toxicity of Organic Compounds with Respect to Daphnia magna
    Grigor'ev, V. Yu.
    Razdol'skii, A. N.
    Zagrebin, A. O.
    Tonkopii, V. D.
    Raevskii, O. A.
    PHARMACEUTICAL CHEMISTRY JOURNAL, 2014, 48 (04) : 242 - 245
  • [4] QSAR Classification Models of Acute Toxicity of Organic Compounds with Respect to Daphnia magna
    V. Yu. Grigor’ev
    A. N. Razdol’skii
    A. O. Zagrebin
    V. D. Tonkopii
    O. A. Raevskii
    Pharmaceutical Chemistry Journal, 2014, 48 : 242 - 245
  • [5] QSAR modeling of Daphnia magna and fish toxicities of biocides using 2D descriptors
    Khan, Kabiruddin
    Khan, Pathan Mohsin
    Lavado, Giovanna
    Valsecchi, Cecile
    Pasqualini, Julia
    Baderna, Diego
    Marzo, Marco
    Lombardo, Anna
    Roy, Kunal
    Benfenati, Emilio
    CHEMOSPHERE, 2019, 229 : 8 - 17
  • [6] ACUTE TOXICITY AND QSAR OF CHLOROPHENOLS ON DAPHNIA-MAGNA
    DEVILLERS, J
    CHAMBON, P
    BULLETIN OF ENVIRONMENTAL CONTAMINATION AND TOXICOLOGY, 1986, 37 (04) : 599 - 605
  • [7] Modeling and prediction by using WHIM descriptors in QSAR studies: Toxicity of heterogeneous chemicals on Daphnia magna
    Todeschini, R
    Vighi, M
    Provenzani, R
    Finizio, A
    Gramatica, P
    CHEMOSPHERE, 1996, 32 (08) : 1527 - 1545
  • [8] CORAL: QSAR modeling of toxicity of organic chemicals towards Daphnia magna
    Toropova, A. P.
    Toropov, A. A.
    Martyanov, S. E.
    Benfenati, E.
    Gini, G.
    Leszczynska, D.
    Leszczynski, J.
    CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS, 2012, 110 (01) : 177 - 181
  • [9] QSAR models for biocides: The example of the prediction of Daphnia magna acute toxicity
    Marzo, M.
    Lavado, G. J.
    Como, F.
    Toropova, A. P.
    Toropov, A. A.
    Baderna, D.
    Cappelli, C.
    Lombardo, A.
    Toma, C.
    Blazquez, M.
    Benfenati, E.
    SAR AND QSAR IN ENVIRONMENTAL RESEARCH, 2020, 31 (03) : 227 - 243
  • [10] QSAR Models for Toxicity of Organic Substances to Daphnia magna Built up by Using the CORAL Freeware
    Toropova, Alla P.
    Toropov, Andrey A.
    Benfenati, Emilio
    Gini, Giuseppina
    CHEMICAL BIOLOGY & DRUG DESIGN, 2012, 79 (03) : 332 - 338