A general approach to mining quality pattern-based clusters from microarray data

被引:0
|
作者
Jiang, DX [1 ]
Pei, J
Zhang, AD
机构
[1] SUNY Buffalo, Buffalo, NY 14260 USA
[2] Simon Fraser Univ, Burnaby, BC V5A 1S6, Canada
关键词
D O I
暂无
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Pattern-based clustering has broad applications in microarray data analysis, customer segmentation, e-business data analysis, etc. However, pattern-based clustering often returns a large number of highly-overlapping clusters, which makes it hard for users to identify interesting patterns from the mining results. Moreover, there lacks of a general model for pattern-based clustering. Different kinds of patterns or different measures on the pattern coherence may require different algorithms. In this paper, we address the above two problems by proposing a general quality-driven approach to mining top-k quality pattern-based clusters. We examine our quality-driven approach using real world microarray data sets. The experimental results show that our method is general, effective and efficient.
引用
收藏
页码:188 / 200
页数:13
相关论文
共 50 条
  • [1] QTOP-K: A novel algorithm for mining high quality pattern-based clusters in GST microarray data
    Chen, Shuhui
    Tang, Zhonghua
    Chen, Bo
    Fu, Hongzhuo
    Hao, Zhifeng
    2006 INTERNATIONAL CONFERENCE ON COMPUTATIONAL INTELLIGENCE AND SECURITY, PTS 1 AND 2, PROCEEDINGS, 2006, : 828 - 831
  • [2] Pattern-based inference approach for data mining
    Sy, BK
    18TH INTERNATIONAL CONFERENCE OF THE NORTH AMERICAN FUZZY INFORMATION PROCESSING SOCIETY - NAFIPS, 1999, : 727 - 731
  • [3] Pattern-based inference approach for data mining
    Sy, Bon K.
    1999,
  • [4] On Reusing Data Mining in Business Processes - A Pattern-Based Approach
    Wegener, Dennis
    Rueping, Stefan
    BUSINESS PROCESS MANAGEMENT WORKSHOPS, 2011, 66 : 264 - 276
  • [5] A Pattern-Based Approach to Parametric Specification Mining
    Reger, Giles
    Barringer, Howard
    Rydeheard, David
    2013 28TH IEEE/ACM INTERNATIONAL CONFERENCE ON AUTOMATED SOFTWARE ENGINEERING (ASE), 2013, : 658 - 663
  • [6] A pattern-based approach for improving model quality
    Mira Balaban
    Azzam Maraee
    Arnon Sturm
    Pavel Jelnov
    Software & Systems Modeling, 2015, 14 : 1527 - 1555
  • [7] A pattern-based approach for improving model quality
    Balaban, Mira
    Maraee, Azzam
    Sturm, Arnon
    Jelnov, Pavel
    SOFTWARE AND SYSTEMS MODELING, 2015, 14 (04): : 1527 - 1555
  • [8] PBC: A Software Framework Facilitating Pattern-Based Clustering for Microarray Data Analysis
    Shin, Dong-Guk
    Hong, Seung-Hyun
    Joshi, Pujan
    Nori, Ravi
    Pei, Baikang
    Wang, Hsin-Wei
    Harrington, Patrick
    Kuo, Lynn
    Kalajzic, Ivo
    Rowe, David
    2009 INTERNATIONAL JOINT CONFERENCE ON BIOINFORMATICS, SYSTEMS BIOLOGY AND INTELLIGENT COMPUTING, PROCEEDINGS, 2009, : 30 - +
  • [9] A pattern based data mining approach
    Delibasic, Boris
    Kirchner, Kathrin
    Ruhland, Johannes
    DATA ANALYSIS, MACHINE LEARNING AND APPLICATIONS, 2008, : 327 - +
  • [10] Discovering pattern-based subspace clusters by pattern tree
    Guan, Jihong
    Gan, Yanglan
    Wang, Hao
    KNOWLEDGE-BASED SYSTEMS, 2009, 22 (08) : 569 - 579