Recent advances on phylogenomics of gymnosperms and a new classification

被引:53
|
作者
Yang, Yong [1 ]
Ferguson, David Kay [2 ]
Liu, Bing [3 ,4 ]
Mao, Kang-Shan [5 ]
Gao, Lian-Ming [6 ,7 ]
Zhang, Shou-Zhou [8 ]
Wan, Tao [8 ]
Rushforth, Keith [9 ]
Zhang, Zhi-Xiang [10 ]
机构
[1] Nanjing Forestry Univ, Coll Biol & Environm, Coinnovat Ctr Sustainable Forestry Southern China, 159 Longpan Rd, Nanjing 210037, Peoples R China
[2] Univ Vienna, Dept Paleontol, A-1090 Vienna, Austria
[3] Chinese Acad Sci, Inst Bot, State Key Lab Systemat & Evolutionary Bot, 20 Nanxincun, Beijing 100093, Peoples R China
[4] Chinese Acad Sci, Sino Afr Joint Res Ctr, Wuhan 430074, Peoples R China
[5] Sichuan Univ, Coll Life Sci, Key Lab Bioresource & Eco Environm, State Key Lab Hydraul & Mt River Engn,Minist Educ, Chengdu 610065, Peoples R China
[6] Chinese Acad Sci, Kunming Inst Bot, CAS Key Lab Plant Divers & Biogeog East Asia, Kunming 650201, Peoples R China
[7] Chinese Acad Sci, Kunming Inst Bot, Lijiang Forest Biodivers Natl Observat & Res Stn, Lijiang 674100, Peoples R China
[8] Shenzhen & Chinese Acad Sci, Key Lab Southern Subtrop Plant Divers, FairyLake Bot Garden, Shenzhen, Peoples R China
[9] The Shippen, Devon EN15 3NL, England
[10] Beijing Forestry Univ, Sch Ecol & Nat Conservat, Beijing, Peoples R China
基金
中国国家自然科学基金;
关键词
Classi fication; Gymnosperms; Morphology; New tribe; Phylogenomics; Taxonomy; GINKGO-BILOBA L; EXTANT GYMNOSPERMS; CUPRESSACEAE; EVOLUTION; GENOME; ORIGIN; GENUS; CIRCUMSCRIPTION; RECONSTRUCTION; PODOCARPACEAE;
D O I
10.1016/j.pld.2022.05.003
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Living gymnosperms comprise four major groups: cycads, Ginkgo, conifers, and gnetophytes. Relation-ships among/within these lineages have not been fully resolved. Next generation sequencing has made available a large number of sequences, including both plastomes and single-copy nuclear genes, for reconstruction of solid phylogenetic trees. Recent advances in gymnosperm phylogenomic studies have updated our knowledge of gymnosperm systematics. Here, we review major advances of gymnosperm phylogeny over the past 10 years and propose an updated classification of extant gymnosperms. This new classification includes three classes (Cycadopsida, Ginkgoopsida, and Pinopsida), five subclasses (Cyca-didae, Ginkgoidae, Cupressidae, Pinidae, and Gnetidae), eight orders (Cycadales, Ginkgoales, Araucariales, Cupressales, Pinales, Ephedrales, Gnetales, and Welwitschiales), 13 families, and 86 genera. We also described six new tribes including Acmopyleae Y. Yang, Austrocedreae Y. Yang, Chamaecyparideae Y. Yang, Microcachrydeae Y. Yang, Papuacedreae Y. Yang, and Prumnopityeae Y. Yang, and made 27 new combinations in the genus Sabina. Copyright (c) 2022 Kunming Institute of Botany, Chinese Academy of Sciences. Publishing services by Elsevier B.V. on behalf of KeAi Communications Co. Ltd. This is an open access article under the CC BY -NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
引用
收藏
页码:340 / 350
页数:11
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