Whole-genome expression profiling of Xylella fastidiosa in response to growth on glucose

被引:17
|
作者
Pashalidis, S
Moreira, LM
Zaini, PA
Campanharo, JC
Alves, LMC
Ciapina, LP
Vêncio, RZN
Lemos, EGM
Da Silva, AM
da Silva, ACR [1 ]
机构
[1] Univ Sao Paulo, Inst Quim, Dept Bioquim, BR-01498 Sao Paulo, Brazil
[2] Univ Estadual Paulista, Fac Ciencias Agr & Vet Jaboticabal, Dept Tecnol, Jaboticabal, Brazil
[3] Univ Sao Paulo, BIOINFO USP Nucl Pesquisas Bioinformat, BR-01498 Sao Paulo, Brazil
关键词
D O I
10.1089/omi.2005.9.77
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Xylella fastidiosa is the etiologic agent of diseases in a wide range of economically important crops including citrus variegated chlorosis, a major threat to the Brazilian citrus industry. The genomes of several strains of this phytopathogen have been completely sequenced enabling large-scale functional studies. In this work we used whole-genome DNA microarrays to investigate the transcription profile of X. fastidiosa grown in defined media with different glucose concentrations. Our analysis revealed that while transcripts related to fastidian gum production were unaffected, colicin-V-like and fimbria precursors were induced in high glucose medium. Based on these results, we suggest a model for colicin-defense mechanism in X. fastidiosa.
引用
收藏
页码:77 / 90
页数:14
相关论文
共 50 条
  • [1] Whole-genome analysis of transporters in the plant pathogen Xylella fastidiosa
    Meidanis, J
    Braga, MDV
    Verjovski-Almeida, S
    MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS, 2002, 66 (02) : 272 - +
  • [2] Whole-genome comparative analysis of three phytopathogenic Xylella fastidiosa strains
    Bhattacharyya, A
    Stilwagen, S
    Ivanova, N
    D'Souza, M
    Bernal, A
    Lykidis, A
    Kapatral, V
    Anderson, L
    Larsen, N
    Los, T
    Reznik, G
    Selkov, E
    Walunas, TL
    Feil, H
    Feil, WS
    Purcell, A
    Lassez, JL
    Hawkins, TL
    Haselkorn, R
    Overbeek, R
    Predki, PF
    Kyrpides, NC
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (19) : 12403 - 12408
  • [3] Whole-genome expression profiling of Thermotoga maritima in response to growth on sugars in a chemostat
    Nguyen, TN
    Ejaz, AD
    Brancieri, MA
    Mikula, AM
    Nelson, KE
    Gill, SR
    Noll, KM
    JOURNAL OF BACTERIOLOGY, 2004, 186 (14) : 4824 - 4828
  • [4] Whole-Genome Expression Profiling of Bradyrhizobium japonicum in Response to Hydrogen Peroxide
    Jeon, Jeong-Min
    Lee, Hae-In
    Donati, Andrew J.
    So, Jae-Seong
    Emerich, David W.
    Chang, Woo-Suk
    MOLECULAR PLANT-MICROBE INTERACTIONS, 2011, 24 (12) : 1472 - 1481
  • [5] Identification of proteomic expression of grapevines in response to Xylella fastidiosa
    Yang, L.
    Lin, H.
    Takahashi, Y.
    Walker, M.
    PHYTOPATHOLOGY, 2007, 97 (07) : S127 - S127
  • [6] Variations of whole genome sequences of Xylella fastidiosa strains within the same pathotype
    Chen, J.
    Xie, G.
    Han, S.
    Civerolo, E.
    PHYTOPATHOLOGY, 2008, 98 (06) : S35 - S35
  • [7] Two whole genome sequences of Xylella fastidiosa almond leaf scorch strains
    Chen, J.
    Han, S.
    Civerolo, E.
    Stenger, D. C.
    Van Sluys, M.
    PHYTOPATHOLOGY, 2007, 97 (07) : S21 - S22
  • [8] Whole Genome Sequence of Xylella fastidiosa ATCC 35879T and Detection of Genome Rearrangements Within Subsp. fastidiosa
    J. Chen
    M. O’Leary
    L. Burbank
    Z. Zheng
    X. Deng
    Current Microbiology, 2020, 77 : 1858 - 1863
  • [9] Whole Genome Sequence of Xylella fastidiosa ATCC 35879T and Detection of Genome Rearrangements Within Subsp. fastidiosa
    Chen, J.
    O'Leary, M.
    Burbank, L.
    Zheng, Z.
    Deng, X.
    CURRENT MICROBIOLOGY, 2020, 77 (08) : 1858 - 1863
  • [10] A new microarray platform for whole-genome expression profiling of Mycobacterium tuberculosis
    Venkataraman, Balaji
    Vasudevan, Madavan
    Gupta, Amita
    JOURNAL OF MICROBIOLOGICAL METHODS, 2014, 97 : 34 - 43