Extending Classical Molecular Theory with Polarization

被引:13
|
作者
Keyes, Tom [1 ]
Napoleon, Raeanne L. [1 ]
机构
[1] Boston Univ, Dept Chem, Boston, MA 02215 USA
来源
JOURNAL OF PHYSICAL CHEMISTRY B | 2011年 / 115卷 / 03期
基金
美国国家科学基金会;
关键词
TRANSFERABLE INTERACTION MODELS; VIBRATIONAL ECHO EXPERIMENTS; DYNAMICS SIMULATION; N-METHYLACETAMIDE; ELECTRIC-FIELDS; CARBON-MONOXIDE; DIPOLE-MOMENT; HEME POCKET; DILUTE HOD; MYOGLOBIN;
D O I
10.1021/jp105595q
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A classical, polarizable, electrostatic theory of short-ranged atom-atom interactions, incorporating the smeared nature of atomic partial charges, is presented. Detailed models are constructed for CO monomer and for CO interacting with an iron atom, as a first step toward heme proteins. A good representation is obtained of the bond-length-dependent dipole of CO monomer from fitting at the equilibrium distance only. Essential features of the binding of CO to myoglobin (Mb) and model heme compounds, including the binding energy, the position of the minimum in the Fe-C potential, the Fe-C frequency, the bending energy, the linear geometry of FeCO, and the increase of the Stark tuning rate and IR intensity, are obtained, suggesting that a substantial part of the Fe-CO interaction consists of a classical, noncovalent, "electrostatic bond ". The binding energy is primarily polarization energy, and the polarization energy of an OH pair in water is shown to be comparable to the experimental hydrogen bond energy.
引用
收藏
页码:522 / 531
页数:10
相关论文
共 50 条