Three-Dimensional Semantic Segmentation of Diabetic Retinopathy Lesions and Grading Using Transfer Learning

被引:16
|
作者
Shaukat, Natasha [1 ]
Amin, Javeria [2 ]
Sharif, Muhammad [1 ]
Azam, Faisal [1 ]
Kadry, Seifedine [3 ]
Krishnamoorthy, Sujatha [4 ,5 ]
机构
[1] COMSATS Univ Islamabad, Dept Comp Sci, Wah Campus, Wah Cantt 47010, Pakistan
[2] Univ Wah, Dept Comp Sci, Wah Campus, Wah Cantt 47010, Pakistan
[3] Noroff Univ Coll, Dept Appl Data Sci, N-4612 Kristiansand, Norway
[4] Wenzhou Kean Univ, Zhejiang Bioinformat Int Sci & Technol Cooperat C, Wenzhou 325060, Peoples R China
[5] Wenzhou Kean Univ, Wenzhou Municipal Key Lab Appl Biomed & Biopharma, Wenzhou 325060, Peoples R China
来源
JOURNAL OF PERSONALIZED MEDICINE | 2022年 / 12卷 / 09期
关键词
deeplabv3; convolutional neural network; Messidor; lesions; DR; INTEGRATED DESIGN; CLASSIFICATION; FUSION; RECOGNITION; FEATURES; LOCALIZATION; ARCHITECTURE;
D O I
10.3390/jpm12091454
中图分类号
R19 [保健组织与事业(卫生事业管理)];
学科分类号
摘要
Diabetic retinopathy (DR) is a drastic disease. DR embarks on vision impairment when it is left undetected. In this article, learning-based techniques are presented for the segmentation and classification of DR lesions. The pre-trained Xception model is utilized for deep feature extraction in the segmentation phase. The extracted features are fed to Deeplabv3 for semantic segmentation. For the training of the segmentation model, an experiment is performed for the selection of the optimal hyperparameters that provided effective segmentation results in the testing phase. The multi-classification model is developed for feature extraction using the fully connected (FC) MatMul layer of efficient-net-b0 and pool-10 of the squeeze-net. The extracted features from both models are fused serially, having the dimension of N x 2020, amidst the best N x 1032 features chosen by applying the marine predictor algorithm (MPA). The multi-classification of the DR lesions into grades 0, 1, 2, and 3 is performed using neural network and KNN classifiers. The proposed method performance is validated on open access datasets such as DIARETDB1, e-ophtha-EX, IDRiD, and Messidor. The obtained results are better compared to those of the latest published works.
引用
收藏
页数:17
相关论文
共 50 条
  • [1] Semantic Segmentation of Diabetic Retinopathy Lesions, Using a UNET with Pretrained Encoder
    Theodoropoulos, Dimitrios
    Manikis, Georgios C.
    Marias, Kostantinos
    Papadourakis, Giorgos
    ENGINEERING APPLICATIONS OF NEURAL NETWORKS, EAAAI/EANN 2022, 2022, 1600 : 361 - 371
  • [2] Semantic Segmentation using Three-Dimensional Cellular Evolutionary Networks
    Shimazaki, Ken
    Nagao, Tomoharu
    2016 IEEE INTERNATIONAL CONFERENCE ON SYSTEMS, MAN, AND CYBERNETICS (SMC), 2016, : 1411 - 1416
  • [3] Multi-Task Learning for Diabetic Retinopathy Grading and Lesion Segmentation
    Foo, Alex
    Hsu, Wynne
    Lee, Mong Li
    Lim, Gilbert
    Wong, Tien Yin
    THIRTY-FOURTH AAAI CONFERENCE ON ARTIFICIAL INTELLIGENCE, THE THIRTY-SECOND INNOVATIVE APPLICATIONS OF ARTIFICIAL INTELLIGENCE CONFERENCE AND THE TENTH AAAI SYMPOSIUM ON EDUCATIONAL ADVANCES IN ARTIFICIAL INTELLIGENCE, 2020, 34 : 13267 - 13272
  • [4] Grading Diabetic Retinopathy Using Transfer Learning-Based Convolutional Neural Networks
    Escorcia-Gutierrez, Jose
    Cuello, Jose
    Gamarra, Margarita
    Romero-Aroca, Pere
    Caicedo, Eduardo
    Valls, Aida
    Puig, Domenec
    COMPUTER INFORMATION SYSTEMS AND INDUSTRIAL MANAGEMENT, CISIM 2023, 2023, 14164 : 240 - 252
  • [5] Automated detecting and severity grading of diabetic retinopathy using transfer learning and attention mechanism
    Dinpajhouh, Maryam
    Seyyedsalehi, Seyyed Ali
    NEURAL COMPUTING & APPLICATIONS, 2023, 35 (33): : 23959 - 23971
  • [6] Automated detecting and severity grading of diabetic retinopathy using transfer learning and attention mechanism
    Maryam Dinpajhouh
    Seyyed Ali Seyyedsalehi
    Neural Computing and Applications, 2023, 35 : 23959 - 23971
  • [7] Segmentation of Diabetic Retinopathy Lesions by Deep Learning: Achievements and Limitations
    Furtado, Pedro
    PROCEEDINGS OF THE 13TH INTERNATIONAL JOINT CONFERENCE ON BIOMEDICAL ENGINEERING SYSTEMS AND TECHNOLOGIES, VOL 2: BIOIMAGING, 2020, : 95 - 101
  • [8] SEGMENTATION OF DIABETIC RETINOPATHY LESIONS BY DEEP LEARNING: ACHIEVEMENTS AND LIMITATIONS
    Furtado, P.
    Baptista, C.
    Paiva, I.
    DIABETES TECHNOLOGY & THERAPEUTICS, 2020, 22 : A198 - A198
  • [9] Learning multiscale spatial context for three-dimensional point cloud semantic segmentation
    Wang, Yang
    Xiao, Shunping
    JOURNAL OF ELECTRONIC IMAGING, 2020, 29 (06)
  • [10] IDRiD: Diabetic Retinopathy - Segmentation and Grading Challenge
    Porwal, Prasanna
    Pachade, Samiksha
    Kokare, Manesh
    Deshmukh, Girish
    Son, Jaemin
    Bae, Woong
    Liu, Lihong
    Wang, Jianzong
    Liu, Xinhui
    Gao, Liangxin
    Wu, TianBo
    Xiao, Jing
    Wang, Fengyan
    Yin, Baocai
    Wang, Yunzhi
    Danala, Gopichandh
    He, Linsheng
    Choi, Yoon Ho
    Lee, Yeong Chan
    Jung, Sang-Hyuk
    Li, Zhongyu
    Sui, Xiaodan
    Wu, Junyan
    Li, Xiaolong
    Zhou, Ting
    Toth, Janos
    Bara, Agnes
    Kori, Avinash
    Chennamsetty, Sai Saketh
    Safwan, Mohammed
    Alex, Varghese
    Lyu, Xingzheng
    Cheng, Li
    Chu, Qinhao
    Li, Pengcheng
    Ji, Xin
    Zhang, Sanyuan
    Shen, Yaxin
    Dai, Ling
    Saha, Oindrila
    Sathish, Rachana
    Melo, Tania
    Araujo, Teresa
    Harangi, Balazs
    Sheng, Bin
    Fang, Ruogu
    Sheet, Debdoot
    Hajdu, Andras
    Zheng, Yuanjie
    Mendonca, Ana Maria
    MEDICAL IMAGE ANALYSIS, 2020, 59