Complete chloroplast genome of Baccaurea ramiflora and its phylogenetic analysis

被引:2
|
作者
Niu, Ying-feng [1 ]
Liu, Jin [1 ]
机构
[1] Yunnan Inst Trop Crops, Xishuangbanna, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2022年 / 7卷 / 01期
关键词
Baccaurea ramiflora; Chloroplast genome; phylogenetic analysis;
D O I
10.1080/23802359.2021.2010616
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Baccaurea ramiflora Lour. is a popular tropical fruit tree, mainly grown in Myanmar, India, and other tropical or sub-tropical regions where it is commonly referred to as Myanmar grapes, Burmese grapes, or Latkan, respectively. Besides food, B. ramiflora is a traditional medicinal plant with several pharmaceutical effects. It is also a crucial component of Chinese Dai medicine. Here, the chloroplast genome of B. ramiflora was sequenced, assembled, and annotated. The complete chloroplast genome is 161,093 bp in length with a GC content of 36.71%. Additionally, it comprises a large single-copy region (LSC) of 89,503 bp, a small single-copy region (SSC) of 18,818 bp, and two inverted repeat regions (IRa and IRb) of 26,386 bp. In total, 128 genes were annotated, including 82 protein-coding genes, 37 tRNA genes, 8 rRNA genes, and 1 pseudogene. Phylogenetic analysis revealed that B. ramiflora is closely related to Phyllanthus emblica, Glochidion chodoense, and Phyllanthus amarus. This study provides useful genomic information for future phylogenetic studies of B. ramiflora and Phyllanthaceae family.
引用
收藏
页码:206 / 207
页数:2
相关论文
共 50 条
  • [1] Complete chloroplast genome of Baccaurea ramiflora (phyllanthaceae), a promising underutilized species
    Hu, Gang
    Wu, Hongping
    Zhang, Zhonghua
    Li, Lei
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (12): : 3362 - 3363
  • [2] The Complete Chloroplast Genome of Baccaurea ramiflora Lour. Cultivar Ha Chau (Phyllanthaceae, Malpighiales)
    Nguyen, Pham Anh Thi
    Nguyen, Hanh An
    Do, Hoang Dang Khoa
    Tan Khang, Do
    ECOLOGY AND EVOLUTION, 2025, 15 (03):
  • [3] The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis
    Xu, Jinshi
    Dang, Han
    Li, Huaizhu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (02): : 1134 - 1135
  • [4] The complete chloroplast genome of Camellia gauchowensis and its phylogenetic analysis
    Zhang, Yuanlan
    Wang, Guibin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2299 - 2300
  • [5] The complete chloroplast genome of Cirsium setosum and its phylogenetic analysis
    Xie, Binxin
    Jiang, Chunyan
    Zhu, Ziyan
    Li, Mingzhi
    Zhao, Yucheng
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3756 - 3757
  • [6] The complete chloroplast genome of Enhalus acodoides and its phylogenetic analysis
    Lie, Tao
    Wu, Zhongjie
    Jia, Xuli
    Chen, Shiquan
    Cai, Zefu
    Shen, Jie
    Wang, Daoru
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3667 - 3668
  • [7] The complete chloroplast genome of Aegle marmelos and its phylogenetic analysis
    Wang, Sijia
    Xiang, Rushuang
    Kong, Lingyang
    Zhang, Zhanping
    Lu, Jiaxin
    Liu, Xiubo
    Ma, Wei
    MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (07): : 787 - 790
  • [8] The complete chloroplast genome of Sargassum horneri and its phylogenetic analysis
    Cui, Yutong
    Liu, Tao
    Wang, Xumin
    Qu, Jiangyong
    Jia, Xuli
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3312 - 3313
  • [9] The complete chloroplast genome of Holarrhena pubescens and its phylogenetic analysis
    Xiang, Rushuang
    Wang, Sijia
    Wan, Huihua
    MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (02): : 266 - 269
  • [10] Complete chloroplast genome sequence of Rosa roxburghii and its phylogenetic analysis
    Wang, Qian
    Hu, Huan
    An, Jiaxing
    Bai, Guohui
    Ren, Qunli
    Liu, Jianguo
    MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (01): : 149 - 150