Adaptive learning algorithms for Nernst potential and I-V curves in nerve cell membrane ion channels modeled as hidden Markov models

被引:4
|
作者
Krishnamurthy, V [1 ]
Chung, SH
机构
[1] Univ British Columbia, Dept Elect & Comp Engn, Vancouver, BC V6T 1Z4, Canada
[2] Univ Melbourne, Dept Elect & Elect Engn, Melbourne, Vic 3010, Australia
[3] Australian Natl Univ, Res Sch Phys Sci & Engn, Biophys Grp, Canberra, ACT 0200, Australia
关键词
discrete stochastic approximation; hidden Markov models (HMMs); ion channel currents; Nernst potential;
D O I
10.1109/TNB.2003.820275
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We present discrete stochastic optimization algorithms that adaptively learn the Nernst potential in membrane ion channels. The proposed algorithms dynamically control both the ion channel experiment and the resulting hidden Markov model signal processor and can adapt to time-varying behavior of ion channels. One of the most important properties of the proposed algorithms is their its self-learning capability-they spend most of the computational effort at the global optimizer (Nernst potential). Numerical examples illustrate the performance of the algorithms on computer-generated synthetic data.
引用
收藏
页码:266 / 278
页数:13
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