A Novel TCGA-Validated, MiRNA-Based Signature for Prediction of Breast Cancer Prognosis and Survival

被引:11
|
作者
Tian, Baoxing [1 ]
Hou, Mengjie [2 ]
Zhou, Kun [3 ]
Qiu, Xia [1 ]
Du, Yibao [1 ]
Gu, Yifan [1 ]
Yin, Xiaoxing [3 ]
Wang, Jie [1 ]
机构
[1] Shanghai Jiao Tong Univ, Tongren Hosp, Dept Breast Surg, Sch Med, Shanghai, Peoples R China
[2] Shanghai Jiao Tong Univ, Shanghai Key Lab Tissue Engn, Dept Plast & Reconstruct Surg, Shanghai Peoples Hosp 9,Sch Med, Shanghai, Peoples R China
[3] Fudan Univ, Jingan Dist Ctr Hosp, Dept Gen Surg, Shanghai, Peoples R China
关键词
breast cancer; miRNA; prognostic model; biomarker; signature; TCGA; STAGE; EXPRESSION; IDENTIFICATION; RESISTANCE; DECISIONS; TAMOXIFEN;
D O I
10.3389/fcell.2021.717462
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Breast cancer (BC) is the most common cancer affecting women and the leading cause of cancer-related deaths worldwide. Compelling evidence indicates that microRNAs (miRNAs) are inextricably involved in the development of cancer. Here, we constructed a novel model, based on miRNA-seq and clinical data downloaded from The Cancer Genome Atlas (TCGA). Data from a total of 962 patients were included in this study, and the relationships among their clinicopathological features, survival, and miRNA-seq expression levels were analyzed. Hsa-miR-186 and hsa-miR-361 were identified as internal reference miRNAs and used to normalize miRNA expression data. A five-miRNA signature, constructed using univariate and multivariate Cox regression, was significantly associated with disease-specific survival (DSS) of patients with BC. Kaplan-Meier (KM) and receiver operating characteristic (ROC) analyses were conducted to confirm the clinical significance of the five-miRNA signature. Finally, a nomogram was constructed based on the five-miRNA signature to evaluate its clinical value. Cox regression analysis revealed that a five-miRNA signature was significantly associated with DSS of patients with BC. KM analysis demonstrated that the signature could efficiently distinguish high- and low-risk patients. Moreover, ROC analysis showed that the five-miRNA signature exhibited high sensitivity and specificity in predicting the prognosis of patients with BC. Patients in the high-risk subgroup who received adjuvant chemotherapy had a significantly lower incidence of mortality than those who did not. A nomogram constructed based on the five-miRNA signature was effective in predicting 5-year DSS. This study presents a novel five-miRNA signature as a reliable prognostic tool to predict DSS and provide theoretical reference significance for individualized clinical decisions for patients with BC.
引用
收藏
页数:13
相关论文
共 50 条
  • [1] A novel TCGA-validated programmed cell-death-related signature of ovarian cancer
    Cai, Xintong
    Lin, Jie
    Liu, Li
    Zheng, Jianfeng
    Liu, Qinying
    Ji, Liyan
    Sun, Yang
    BMC CANCER, 2024, 24 (01)
  • [2] A Novel Circulating MiRNA-Based Signature for the Diagnosis and Prognosis Prediction of Early-Stage Cervical Cancer
    Qiu, Huajuan
    Liang, Duoxian
    Liu, Limin
    Xiang, Qun
    Yi, Zhijun
    Ji, Yanqin
    TECHNOLOGY IN CANCER RESEARCH & TREATMENT, 2020, 19
  • [3] A novel circulating miRNA-based signature for the early diagnosis and prognosis prediction of non-small-cell lung cancer
    Zhou, Chengwei
    Chen, Zixuan
    Zhao, Lili
    Zhao, Weijun
    Zhu, Yonggang
    Liu, Jiayuan
    Zhao, Xiaodong
    JOURNAL OF CLINICAL LABORATORY ANALYSIS, 2020, 34 (11)
  • [4] A novel miRNA-based signature as predictive tool of survival outcome of colorectal cancer patients
    Zhao, Bochao
    Wang, Weiqiang
    Ye, Haikun
    Wang, Jingchao
    Meng, Kewei
    Yang, Tao
    CHEMICAL BIOLOGY & DRUG DESIGN, 2023, 102 (05) : 1024 - 1033
  • [5] Identification of miRNA-Based Signature as a Novel Potential Prognostic Biomarker in Patients with Breast Cancer
    Tang, Jia
    Ma, Wei
    Zeng, Qinlong
    Tan, Jieliang
    Cao, Keshen
    Luo, Liangping
    DISEASE MARKERS, 2019, 2019
  • [6] miRNA-Based Cancer Classifier from TCGA Expression Profiles
    Imtiaz, Tashifa
    Patel, Dhruv
    Wong, Justin J. M.
    Tyryshkin, Kathrin
    Renwick, Neil
    FASEB JOURNAL, 2022, 36
  • [7] Identification of a novel miRNA-based recurrence and prognosis prediction biomarker for hepatocellular carcinoma
    Xuanfeng Zhang
    Dong Zhang
    Xuefeng Bu
    Xinhui Zhang
    Long Cui
    BMC Bioinformatics, 23
  • [8] Identification of a novel miRNA-based recurrence and prognosis prediction biomarker for hepatocellular carcinoma
    Zhang, Xuanfeng
    Zhang, Dong
    Bu, Xuefeng
    Zhang, Xinhui
    Cui, Long
    BMC BIOINFORMATICS, 2022, 23 (01)
  • [9] Serum miRNA-based Prediction of Axillary Lymph Node Metastasis in Breast Cancer
    Shiino, Sho
    Matsuzaki, Juntaro
    Shimomura, Akihiko
    Kawauchi, Junpei
    Takizawa, Satoko
    Sakamoto, Hiromi
    Aoki, Yoshiaki
    Yoshida, Masayuki
    Tamura, Kenji
    Kato, Ken
    Kinoshita, Takayuki
    Kitagawa, Yuko
    Ochiya, Takahiro
    CLINICAL CANCER RESEARCH, 2019, 25 (06) : 1817 - 1827
  • [10] Development of a miRNA-based signature to predict human cancer metastasis
    Willetts, Lian
    Stoletov, Konstantin
    Jovel, Juan
    Woolner, Emma
    Lewis, John D.
    CANCER RESEARCH, 2017, 77