Evolutionary Conflict Leads to Innovation: Symmetry Breaking in a Spatial Model of RNA-Like Replicators

被引:5
|
作者
von der Dunk, Samuel H. A. [1 ]
Colizzi, Enrico Sandro [1 ]
Hogeweg, Paulien [1 ]
机构
[1] Univ Utrecht, Theoret Biol & Bioinformat, NL-3584 CH Utrecht, Netherlands
来源
LIFE-BASEL | 2017年 / 7卷 / 04期
关键词
RNA world; division of labour; symmetry breaking; catalysis; spatial model; higher-level selection; multilevel evolution;
D O I
10.3390/life7040043
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Molecules that replicate in trans are vulnerable to evolutionary extinction because they decrease the catalysis of replication to become more available as a template for replication. This problem can be alleviated with higher-level selection that clusters molecules of the same phenotype, favouring those groups that contain more catalysis. Here, we study a simple replicator model with implicit higher-level selection through space. We ask whether the functionality of such system can be enhanced when molecules reproduce through complementary replication, representing RNA-like replicators. For high diffusion, symmetry breaking between complementary strands occurs: one strand becomes a specialised catalyst and the other a specialised template. In ensemble, such replicators can modulate their catalytic activity depending on their environment, thereby mitigating the conflict between levels of selection. In addition, these replicators are more evolvable, facilitating survival in extreme conditions (i.e., for higher diffusion rates). Our model highlights that evolution with implicit higher-level selectioni.e., as a result of local interactions and spatial patterningis very flexible. For different diffusion rates, different solutions to the selective conflict arise. Our results support an RNA World by showing that complementary replicators may have various ways to evolve more complexity.
引用
收藏
页数:17
相关论文
共 30 条
  • [1] Parasites Sustain and Enhance RNA-Like Replicators through Spatial Self-Organisation
    Colizzi, Enrico Sandro
    Hogeweg, Paulien
    PLOS COMPUTATIONAL BIOLOGY, 2016, 12 (04)
  • [2] Comments on "Evolutionary dynamics of RNA-like replicator systems"
    Higgs, Paul G.
    PHYSICS OF LIFE REVIEWS, 2012, 9 (03) : 270 - 271
  • [3] RNA-like model on the Husimi lattice
    Zara, Reginaldo A.
    Pretti, Marco
    PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, 2006, 371 (01) : 88 - 91
  • [4] TRANSFER RNA-LIKE STRUCTURES - STRUCTURE, FUNCTION AND EVOLUTIONARY SIGNIFICANCE
    MANS, RMW
    PLEIJ, CWA
    BOSCH, L
    EUROPEAN JOURNAL OF BIOCHEMISTRY, 1991, 201 (02): : 303 - 324
  • [5] A Polyaddition Model for the Prebiotic Polymerization of RNA and RNA-Like Polymers
    Spaeth, Alex
    Hargrave, Mason
    LIFE-BASEL, 2020, 10 (02):
  • [6] Chemically controlled unfolding of a RNA-like polymer model
    Buzano, C.
    Pretti, M.
    PHYSICAL REVIEW E, 2012, 86 (04):
  • [7] Exact solution of a RNA-like polymer model on the Husimi lattice
    Zara, Reginaldo A.
    Pretti, Marco
    JOURNAL OF CHEMICAL PHYSICS, 2007, 127 (18):
  • [8] RNA-like polymer model: Exact calculation on the Bethe lattice
    Pretti, M.
    PHYSICAL REVIEW E, 2006, 74 (05):
  • [9] Reply to the commentaries on "Evolutionary dynamics of RNA-like replicator systems: A bioinformatic approach to the origin of life"
    Takeuchi, Nobuto
    Hogeweg, Paulien
    PHYSICS OF LIFE REVIEWS, 2012, 9 (03) : 279 - 284
  • [10] Efficient and high-fidelity copying of an RNA-like model prebiotic system
    Zhang, Shenglong
    Gryaznov, Sergei M.
    Szostak, Jack W.
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2013, 31 : 3 - 3