Integrated Analysis of Single-Cell and Spatial Transcriptomics in Keloids: Highlights on Fibrovascular Interactions in Keloid
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作者:
Shim, Joonho
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Sungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South Korea
Sungkyunkwan Univ, Samsung Med Ctr, Sch Med, Samsung Genom Inst, Seoul, South KoreaSungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South Korea
Shim, Joonho
[1
,2
]
Oh, Se Jin
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Sungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South KoreaSungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South Korea
Oh, Se Jin
[1
]
Yeo, Eunhye
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机构:
Sungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South Korea
Sungkyunkwan Univ, Samsung Adv Inst Hlth Sci & Technol, Dept Med Device Management & Res, Seoul, South KoreaSungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South Korea
Yeo, Eunhye
[1
,3
]
Park, Ji Hye
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机构:
Sungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South KoreaSungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South Korea
Park, Ji Hye
[1
]
Bae, Jai Hee
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机构:
Sungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South KoreaSungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South Korea
Bae, Jai Hee
[1
]
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Kim, Seok-Hyung
[4
]
Lee, Dongyoun
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机构:
Sungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South KoreaSungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South Korea
Lee, Dongyoun
[1
]
Lee, Jong Hee
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机构:
Sungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South Korea
Sungkyunkwan Univ, Samsung Adv Inst Hlth Sci & Technol, Dept Med Device Management & Res, Seoul, South KoreaSungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South Korea
Lee, Jong Hee
[1
,3
]
机构:
[1] Sungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Dermatol, 81 Irwon Ro, Seoul 06351, South Korea
[2] Sungkyunkwan Univ, Samsung Med Ctr, Sch Med, Samsung Genom Inst, Seoul, South Korea
[3] Sungkyunkwan Univ, Samsung Adv Inst Hlth Sci & Technol, Dept Med Device Management & Res, Seoul, South Korea
[4] Sungkyunkwan Univ, Samsung Med Ctr, Sch Med, Dept Pathol, Seoul, South Korea
Studies on the etiopathogenesis of keloids mostly have focused on fibroblasts and their dysfunction. In this study, two cutting-edge technologies, single-cell RNA sequencing and spatial transcriptomics, were applied to uncover the underlying pathophysiology of keloids. Keloid tissue samples and normal skin control data were analyzed as well as those of patient-matched keloid and normal mature scar. Single-cell RNA sequencing revealed cellular heterogenicity such as fibroblasts, endothelial cells (ECs), and myofibroblasts within the keloids. Spatial transcriptomics results showed that disease-associated fibroblasts were enriched in the deeper keloid areas, mostly located around the spots with endothelial transcripts. Mesenchymal activation was observed in keloid ECs, characterized by dysregulation of TGF-b/SMAD signaling. Colocalization of mesenchymal and vascular markers through multiplex immunofluorescence suggested mesenchymal activation of keloid ECs. Cell???cell interaction analysis identified a significant network between keloid fibroblasts and ECs, and this cellular crosstalk was supported by colocalization analysis of spatial transcriptomics. This study depicted the cellular landscape of keloids at a single-cell resolution as well as the integration of single-cell and valuable spatial data of keloids using spatial transcriptomics and multiplex immunofluorescence technologies. Our findings suggested a potential role of fibrovascular communication and mesenchymal activation of ECs that might be involved in the keloid pathogenesis.
机构:
Changchun Univ Chinese Med, Affiliated Hosp, Dept Anesthesiol, Changchun, Peoples R ChinaChangchun Univ Chinese Med, Affiliated Hosp, Dept Anesthesiol, Changchun, Peoples R China
Xin, Yan
Ma, Qiji
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Changchun Univ Chinese Med, Affliated Hosp, Dept Breast & Thyroid Surg, Changchun, Peoples R ChinaChangchun Univ Chinese Med, Affiliated Hosp, Dept Anesthesiol, Changchun, Peoples R China
Ma, Qiji
Deng, Qiang
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Changchun Univ Chinese Med, Affliated Hosp, Dept Breast & Thyroid Surg, Changchun, Peoples R ChinaChangchun Univ Chinese Med, Affiliated Hosp, Dept Anesthesiol, Changchun, Peoples R China
Deng, Qiang
Wang, Tielin
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Changchun Univ Chinese Med, Coll Acupuncture Moxibust & Tuina, Changchun, Peoples R ChinaChangchun Univ Chinese Med, Affiliated Hosp, Dept Anesthesiol, Changchun, Peoples R China
Wang, Tielin
Wang, Dongxu
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Jilin Univ, Coll Anim Sci, Lab Anim Ctr, Changchun, Peoples R ChinaChangchun Univ Chinese Med, Affiliated Hosp, Dept Anesthesiol, Changchun, Peoples R China
Wang, Dongxu
Wang, Gang
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Changchun Univ Chinese Med, Affliated Hosp, Dept Breast & Thyroid Surg, Changchun, Peoples R ChinaChangchun Univ Chinese Med, Affiliated Hosp, Dept Anesthesiol, Changchun, Peoples R China
机构:Department of Pathology and Pittsburgh Liver Research Center, University of Pittsburgh School of Medicine and University of Pittsburgh Medical Center, PA, Pittsburgh
Monga, Satdarshan P.
Ko, Sungjin
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机构:Department of Pathology and Pittsburgh Liver Research Center, University of Pittsburgh School of Medicine and University of Pittsburgh Medical Center, PA, Pittsburgh
Ko, Sungjin
Hu, Shikai
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机构:Department of Pathology and Pittsburgh Liver Research Center, University of Pittsburgh School of Medicine and University of Pittsburgh Medical Center, PA, Pittsburgh
Hu, Shikai
Singh, Sucha
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机构:Department of Pathology and Pittsburgh Liver Research Center, University of Pittsburgh School of Medicine and University of Pittsburgh Medical Center, PA, Pittsburgh
Singh, Sucha
Poddar, Minakshi
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机构:Department of Pathology and Pittsburgh Liver Research Center, University of Pittsburgh School of Medicine and University of Pittsburgh Medical Center, PA, Pittsburgh
机构:
Yale Sch Med, Dept Anesthesiol, New Haven, CT 06511 USA
Yale Univ, Dept Biomed Engn, New Haven, CT 06511 USA
Yale Sch Med, Pulm Crit Care & Sleep Med, New Haven, CT 06511 USA
Yale Univ, Dept Immunobiol, New Haven, CT 06511 USAYale Sch Med, Dept Anesthesiol, New Haven, CT 06511 USA
Raredon, Micha Sam Brickman
Yang, Junchen
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Yale Univ, Interdept Program Computat Biol & Bioinformat, New Haven, CT 06511 USAYale Sch Med, Dept Anesthesiol, New Haven, CT 06511 USA
Yang, Junchen
Kothapalli, Neeharika
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Yale Sch Med, Pulm Crit Care & Sleep Med, New Haven, CT 06511 USAYale Sch Med, Dept Anesthesiol, New Haven, CT 06511 USA
Kothapalli, Neeharika
Lewis, Wesley
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Yale Univ, Interdept Program Computat Biol & Bioinformat, New Haven, CT 06511 USAYale Sch Med, Dept Anesthesiol, New Haven, CT 06511 USA
Lewis, Wesley
Kaminski, Naftali
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Yale Sch Med, Pulm Crit Care & Sleep Med, New Haven, CT 06511 USAYale Sch Med, Dept Anesthesiol, New Haven, CT 06511 USA
Kaminski, Naftali
Niklason, Laura E.
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Yale Sch Med, Dept Anesthesiol, New Haven, CT 06511 USA
Yale Univ, Dept Biomed Engn, New Haven, CT 06511 USAYale Sch Med, Dept Anesthesiol, New Haven, CT 06511 USA
Niklason, Laura E.
Kluger, Yuval
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Yale Univ, Interdept Program Computat Biol & Bioinformat, New Haven, CT 06511 USA
Yale Sch Med, Dept Pathol, New Haven, CT 06511 USA
Yale Univ, Appl Math Program, New Haven, CT 06511 USAYale Sch Med, Dept Anesthesiol, New Haven, CT 06511 USA
机构:
Kyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, JapanKyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
Iwahashi, Norifusa
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Umakoshi, Hironobu
Fujita, Masamichi
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Kyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, JapanKyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
Fujita, Masamichi
Fukumoto, Tazuru
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Kyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, JapanKyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
Fukumoto, Tazuru
Ogasawara, Tatsuki
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Kyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, JapanKyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
Ogasawara, Tatsuki
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Yokomoto-Umakoshi, Maki
Kaneko, Hiroki
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Kyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, JapanKyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
Kaneko, Hiroki
Nakao, Hiroshi
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Nakao, Hiroshi
Kawamura, Namiko
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Kyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, JapanKyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
Kawamura, Namiko
Uchida, Naohiro
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Kyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, JapanKyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
Uchida, Naohiro
Matsuda, Yayoi
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Kyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, JapanKyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
Matsuda, Yayoi
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Sakamoto, Ryuichi
Seki, Masahide
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Univ Tokyo, Grad Sch Frontier Sci, Dept Computat Biol & Med Sci, Chiba, JapanKyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
Seki, Masahide
Suzuki, Yutaka
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Univ Tokyo, Grad Sch Frontier Sci, Dept Computat Biol & Med Sci, Chiba, JapanKyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
Suzuki, Yutaka
Nakatani, Kohta
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机构:Kyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
Nakatani, Kohta
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Izumi, Yoshihiro
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Bamba, Takeshi
Oda, Yoshinao
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机构:Kyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
Oda, Yoshinao
Ogawa, Yoshihiro
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Kyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
Kyushu Univ, Grad Sch Med Sci, Dept Anat Pathol, Fukuoka, JapanKyushu Univ, Grad Sch Med Sci, Dept Med & Bioregulatory Sci, Fukuoka, Japan
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Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, Chinese Acad Sci, CAS Ctr Excellence Mol Cell Sci,State Key Lab Cell, Shanghai 200031, Peoples R ChinaUniv Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, Chinese Acad Sci, CAS Ctr Excellence Mol Cell Sci,State Key Lab Cell, Shanghai 200031, Peoples R China
Wang, Ran
Peng, Guangdun
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Chinese Acad Sci, Guangzhou Inst Biomed & Hlth, CAS Key Lab Regenerat Biol, Guangdong Prov Key Lab Stem Cell & Regenerat Med, Guangzhou 510530, Peoples R China
Chinese Acad Sci, Inst Stem Cell & Regenerat, Beijing 100101, Peoples R ChinaUniv Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, Chinese Acad Sci, CAS Ctr Excellence Mol Cell Sci,State Key Lab Cell, Shanghai 200031, Peoples R China
Peng, Guangdun
Tam, Patrick P. L.
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Univ Sydney, Childrens Med Res Inst, Embryol Res Unit, Sydney, NSW 2145, Australia
Univ Sydney, Fac Med & Hlth, Sch Med Sci, Sydney, NSW 2145, AustraliaUniv Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, Chinese Acad Sci, CAS Ctr Excellence Mol Cell Sci,State Key Lab Cell, Shanghai 200031, Peoples R China
Tam, Patrick P. L.
Jing, Naihe
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Univ Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, Chinese Acad Sci, CAS Ctr Excellence Mol Cell Sci,State Key Lab Cell, Shanghai 200031, Peoples R China
Chinese Acad Sci, Guangzhou Inst Biomed & Hlth, CAS Key Lab Regenerat Biol, Guangdong Prov Key Lab Stem Cell & Regenerat Med, Guangzhou 510530, Peoples R China
Chinese Acad Sci, Inst Stem Cell & Regenerat, Beijing 100101, Peoples R China
Guangzhou Lab, Guangzhou 510005, Peoples R ChinaUniv Chinese Acad Sci, Shanghai Inst Biochem & Cell Biol, Chinese Acad Sci, CAS Ctr Excellence Mol Cell Sci,State Key Lab Cell, Shanghai 200031, Peoples R China
机构:
Chinese Acad Med Sci, Peking Union Med Coll Hosp, Peking Union Med Coll, Dept Plast Surg, Beijing, Peoples R ChinaChinese Acad Med Sci, Peking Union Med Coll Hosp, Peking Union Med Coll, Dept Plast Surg, Beijing, Peoples R China
Xia, Yijun
Wang, Youbin
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Peking Union Med Coll Hosp, Dept Plast Surg, Beijing, Peoples R ChinaChinese Acad Med Sci, Peking Union Med Coll Hosp, Peking Union Med Coll, Dept Plast Surg, Beijing, Peoples R China
Wang, Youbin
Shan, Mengjie
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Chinese Acad Med Sci, Peking Union Med Coll Hosp, Peking Union Med Coll, Dept Plast Surg, Beijing, Peoples R ChinaChinese Acad Med Sci, Peking Union Med Coll Hosp, Peking Union Med Coll, Dept Plast Surg, Beijing, Peoples R China
Shan, Mengjie
Hao, Yan
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Chinese Acad Med Sci, Peking Union Med Coll Hosp, Peking Union Med Coll, Dept Plast Surg, Beijing, Peoples R ChinaChinese Acad Med Sci, Peking Union Med Coll Hosp, Peking Union Med Coll, Dept Plast Surg, Beijing, Peoples R China
Hao, Yan
Liang, Zhengyun
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Chinese Acad Med Sci, Peking Union Med Coll Hosp, Peking Union Med Coll, Dept Plast Surg, Beijing, Peoples R ChinaChinese Acad Med Sci, Peking Union Med Coll Hosp, Peking Union Med Coll, Dept Plast Surg, Beijing, Peoples R China
机构:
Chinese Acad Sci, Acad Math & Syst Sci, NCMIS, CEMS,RCSDS, Beijing 100190, Peoples R China
Univ Chinese Acad Sci, Sch Math Sci, Beijing 100049, Peoples R ChinaChinese Acad Sci, Acad Math & Syst Sci, NCMIS, CEMS,RCSDS, Beijing 100190, Peoples R China
Li, Shang
Shen, Qunlun
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Chinese Acad Sci, Acad Math & Syst Sci, NCMIS, CEMS,RCSDS, Beijing 100190, Peoples R China
Univ Chinese Acad Sci, Sch Math Sci, Beijing 100049, Peoples R ChinaChinese Acad Sci, Acad Math & Syst Sci, NCMIS, CEMS,RCSDS, Beijing 100190, Peoples R China
Shen, Qunlun
Zhang, Shihua
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Chinese Acad Sci, Acad Math & Syst Sci, NCMIS, CEMS,RCSDS, Beijing 100190, Peoples R China
Univ Chinese Acad Sci, Sch Math Sci, Beijing 100049, Peoples R China
Univ Chinese Acad Sci, Hangzhou Inst Adv Study, Sch Life Sci, Key Lab Syst Hlth Sci Zhejiang Prov, Hangzhou 310024, Peoples R ChinaChinese Acad Sci, Acad Math & Syst Sci, NCMIS, CEMS,RCSDS, Beijing 100190, Peoples R China